Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1993

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
2,195,551	-		PfGW456L13_1991	0.87	+0.7
2,195,590	+		PfGW456L13_1991	0.89	+0.0
2,195,814	+				-1.5
2,195,814	+				+2.3
2,195,814	+				+0.8
2,195,815	-				+0.2
2,195,815	-				-0.6
2,195,962	+		PfGW456L13_1992	0.30	+1.5
2,195,963	-		PfGW456L13_1992	0.30	+1.9
2,195,963	-		PfGW456L13_1992	0.30	+0.2
2,195,963	-				+2.5
2,195,963	-		PfGW456L13_1992	0.30	+0.5
2,195,963	-		PfGW456L13_1992	0.30	+1.8
2,195,963	-		PfGW456L13_1992	0.30	-3.4
2,195,963	-		PfGW456L13_1992	0.30	+1.3
2,195,963	-		PfGW456L13_1992	0.30	-2.6
2,195,963	-		PfGW456L13_1992	0.30	-1.1
2,196,082	+		PfGW456L13_1992	0.47	+1.7
2,196,082	+		PfGW456L13_1992	0.47	+1.2
2,196,082	+		PfGW456L13_1992	0.47	-0.2
2,196,082	+		PfGW456L13_1992	0.47	-1.9
2,196,082	+		PfGW456L13_1992	0.47	-3.1
2,196,082	+		PfGW456L13_1992	0.47	-1.1
2,196,082	+		PfGW456L13_1992	0.47	-2.6
2,196,083	-		PfGW456L13_1992	0.47	-1.9
2,196,083	-		PfGW456L13_1992	0.47	-2.6
2,196,083	-		PfGW456L13_1992	0.47	+0.8
2,196,083	-		PfGW456L13_1992	0.47	+1.0
2,196,083	-		PfGW456L13_1992	0.47	+0.9
2,196,286	+		PfGW456L13_1992	0.77	+3.0
2,196,287	-		PfGW456L13_1992	0.77	-3.6
2,196,334	+		PfGW456L13_1992	0.84	+0.2
2,196,334	+		PfGW456L13_1992	0.84	+0.5
2,196,335	-		PfGW456L13_1992	0.84	+1.5
2,196,335	-		PfGW456L13_1992	0.84	+0.4
2,196,436	+				+1.9
2,196,437	-				-2.9
2,196,437	-				-2.7
2,196,497	+				+1.4
2,196,497	+				-3.2
2,196,497	+				+1.7
2,196,498	-				+0.6
2,196,531	+				+0.9
2,196,531	+				+1.2
2,196,532	-				+1.2
2,196,532	-				+1.8
2,196,632	+				-0.2
2,197,099	+		PfGW456L13_1993	0.41	+0.9
2,197,100	-		PfGW456L13_1993	0.41	+1.3
2,197,296	+		PfGW456L13_1993	0.56	+2.5
2,197,297	-		PfGW456L13_1993	0.56	+1.4
2,197,297	-		PfGW456L13_1993	0.56	+1.3
2,197,318	-		PfGW456L13_1993	0.57	-2.6
2,197,318	-		PfGW456L13_1993	0.57	+1.4
2,197,353	+		PfGW456L13_1993	0.60	+2.1
2,197,504	-		PfGW456L13_1993	0.71	-1.9
2,197,520	-		PfGW456L13_1993	0.72	-1.3
2,197,728	+		PfGW456L13_1993	0.88	-1.6
2,197,728	+		PfGW456L13_1993	0.88	+1.2
2,197,728	+		PfGW456L13_1993	0.88	-2.1
2,197,728	+		PfGW456L13_1993	0.88	+0.8
2,197,728	+		PfGW456L13_1993	0.88	+1.2
2,197,728	+		PfGW456L13_1993	0.88	-1.9
2,197,762	-				-0.1
2,197,807	+				+0.7
2,197,807	+				-0.7
2,197,808	-				+1.5
2,197,808	-				-1.2
2,197,808	-				-0.1
2,197,808	-				-0.1
2,197,808	-				-0.0
2,197,854	+				+0.5
2,197,854	+				-2.4
2,197,854	+				-3.2
2,197,855	-				+1.5
2,197,855	-				-2.4
2,197,920	+				+1.1
2,197,997	+				-3.5
2,197,997	+				+0.8
2,197,997	+				-0.5
2,197,998	-				+1.5
2,197,998	-				+2.0
2,197,998	-				-1.3
2,197,998	-				+0.1
2,197,998	-				+0.7
2,198,041	+				+1.9
2,198,041	+				+0.9
2,198,041	+				-3.8
2,198,041	+				+0.9
2,198,041	+				+1.1
2,198,041	+				-0.1
2,198,041	+				+0.9
2,198,042	-				+1.8
2,198,042	-				+1.9
2,198,042	-				-1.8
2,198,042	-				+1.2
2,198,042	-				-0.1
2,198,042	-				+1.0
2,198,045	+				-3.1
2,198,045	+				+1.4
2,198,045	+				-1.5
2,198,045	+				-0.2
2,198,046	-				+0.7
2,198,046	-				+1.1
2,198,046	-				-0.9
2,198,046	-				+1.0
2,198,046	-				-1.6
2,198,046	-				+3.2
2,198,114	+		PfGW456L13_1994	0.11	-2.5
2,198,114	+		PfGW456L13_1994	0.11	-1.5
2,198,114	+		PfGW456L13_1994	0.11	+1.8
2,198,115	-		PfGW456L13_1994	0.11	+0.9
2,198,115	-		PfGW456L13_1994	0.11	-0.1
2,198,183	+		PfGW456L13_1994	0.16	+1.0
2,198,297	+		PfGW456L13_1994	0.24	+0.2
2,198,297	+		PfGW456L13_1994	0.24	+1.1
2,198,297	+		PfGW456L13_1994	0.24	-3.1
2,198,297	+		PfGW456L13_1994	0.24	+1.4
2,198,297	+		PfGW456L13_1994	0.24	-2.9
2,198,297	+		PfGW456L13_1994	0.24	-0.3
2,198,297	+		PfGW456L13_1994	0.24	-0.1
2,198,298	-		PfGW456L13_1994	0.24	+1.0
2,198,298	-		PfGW456L13_1994	0.24	-2.4
2,198,298	-		PfGW456L13_1994	0.24	+0.1
2,198,298	-		PfGW456L13_1994	0.24	+0.9
2,198,298	-		PfGW456L13_1994	0.24	+2.4
2,198,298	-		PfGW456L13_1994	0.24	+1.1
2,198,366	+		PfGW456L13_1994	0.29	+0.5
2,198,367	-		PfGW456L13_1994	0.29	+3.2
2,198,367	-		PfGW456L13_1994	0.29	+2.0
2,198,381	+		PfGW456L13_1994	0.30	-2.1
2,198,381	+		PfGW456L13_1994	0.30	+0.4
2,198,381	+		PfGW456L13_1994	0.30	-1.6
2,198,615	+		PfGW456L13_1994	0.47	+0.3
2,198,616	-		PfGW456L13_1994	0.47	-3.6
2,198,616	-		PfGW456L13_1994	0.47	-0.7
2,198,633	+		PfGW456L13_1994	0.48	+0.3
2,198,633	+		PfGW456L13_1994	0.48	+0.9
2,198,633	+		PfGW456L13_1994	0.48	-2.3
2,198,633	+		PfGW456L13_1994	0.48	-0.1
2,198,633	+		PfGW456L13_1994	0.48	+2.3
2,198,633	+		PfGW456L13_1994	0.48	-0.1
2,198,633	+		PfGW456L13_1994	0.48	-1.3
2,198,633	+		PfGW456L13_1994	0.48	+0.9
2,198,633	+		PfGW456L13_1994	0.48	+1.7
2,198,634	-		PfGW456L13_1994	0.48	-2.5
2,198,634	-		PfGW456L13_1994	0.48	-0.7
2,198,634	-		PfGW456L13_1994	0.48	-0.7
2,198,684	-		PfGW456L13_1994	0.52	+0.9
2,198,832	+				+0.2
2,198,832	+		PfGW456L13_1994	0.63	+1.2
2,198,832	+		PfGW456L13_1994	0.63	+1.6
2,198,832	+		PfGW456L13_1994	0.63	+0.5
2,198,832	+		PfGW456L13_1994	0.63	-1.8
2,198,833	-		PfGW456L13_1994	0.63	-0.9
2,198,833	-		PfGW456L13_1994	0.63	+1.6
2,198,833	-		PfGW456L13_1994	0.63	-2.1
2,198,879	+		PfGW456L13_1994	0.66	+1.2
2,198,879	+		PfGW456L13_1994	0.66	+1.4
2,198,880	-		PfGW456L13_1994	0.66	+0.5