Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1637

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
1,798,151	-				+1.5
1,798,210	+				-1.5
1,798,219	+				-1.3
1,798,219	+				+2.6
1,798,334	+		PfGW456L13_1636	0.17	-0.1
1,798,334	+		PfGW456L13_1636	0.17	-0.1
1,798,347	+		PfGW456L13_1636	0.19	-0.9
1,798,348	-		PfGW456L13_1636	0.19	+0.9
1,798,348	-		PfGW456L13_1636	0.19	-2.5
1,798,348	-		PfGW456L13_1636	0.19	-2.3
1,798,383	+		PfGW456L13_1636	0.23	+1.9
1,798,570	-		PfGW456L13_1636	0.47	+0.2
1,798,570	-		PfGW456L13_1636	0.47	-2.1
1,798,590	+		PfGW456L13_1636	0.50	-1.7
1,798,590	+		PfGW456L13_1636	0.50	+1.1
1,798,591	-		PfGW456L13_1636	0.50	+1.3
1,798,652	+		PfGW456L13_1636	0.58	+3.4
1,798,731	+		PfGW456L13_1636	0.68	-3.2
1,798,731	+		PfGW456L13_1636	0.68	-0.0
1,798,731	+		PfGW456L13_1636	0.68	-0.0
1,798,731	+		PfGW456L13_1636	0.68	+0.7
1,798,732	-		PfGW456L13_1636	0.68	-1.8
1,798,732	-		PfGW456L13_1636	0.68	-2.6
1,798,860	+		PfGW456L13_1636	0.84	-0.7
1,798,901	+		PfGW456L13_1636	0.90	-0.9
1,798,902	-		PfGW456L13_1636	0.90	-1.9
1,798,902	-		PfGW456L13_1636	0.90	-1.8
1,798,902	-		PfGW456L13_1636	0.90	-0.7
1,798,905	+				-0.4
1,798,905	+				-1.8
1,798,905	+				+0.4
1,798,905	+				-3.8
1,798,905	+				+1.1
1,798,905	+				-0.4
1,798,905	+				-2.8
1,798,905	+				+0.5
1,798,905	+				-1.9
1,798,905	+				-1.7
1,798,905	+				-2.8
1,798,905	+				+1.7
1,798,905	+				+0.7
1,798,906	-				-2.6
1,798,906	-				-0.6
1,798,906	-				-0.7
1,798,906	-				+2.9
1,798,906	-				-1.5
1,798,906	-				+1.3
1,798,906	-				-1.4
1,798,906	-				-1.1
1,798,908	-				-0.9
1,798,909	+				-0.9
1,798,909	+				-2.7
1,798,909	+				+0.2
1,798,909	+				-2.9
1,798,909	+				+2.1
1,798,909	+				-0.4
1,798,909	+				+1.2
1,798,909	+				+1.0
1,798,909	+				+0.9
1,798,909	+				-1.6
1,798,909	+				+1.5
1,798,910	-				-0.7
1,798,910	-				-0.9
1,798,910	-				+2.8
1,798,910	-				-0.7
1,798,910	-				-1.2
1,798,910	-				-1.2
1,798,910	-				+0.8
1,798,917	+				+0.4
1,798,962	+				-1.9
1,798,983	+				+1.6
1,798,984	-				+1.1
1,798,996	+				+1.3
1,798,996	+				+0.3
1,798,996	+				-0.5
1,798,996	+				+1.0
1,798,997	-				+3.0
1,799,039	+				-0.6
1,799,039	+				-1.5
1,799,039	+				-1.5
1,799,039	+				+0.1
1,799,039	+				-3.0
1,799,106	+				+0.5
1,799,113	+				+0.5
1,799,113	+				+0.7
1,799,181	+				-1.4
1,799,238	+		PfGW456L13_1637	0.17	-1.4
1,799,239	-		PfGW456L13_1637	0.17	-2.8
1,799,264	+		PfGW456L13_1637	0.21	-1.4
1,799,264	+		PfGW456L13_1637	0.21	+3.1
1,799,265	-		PfGW456L13_1637	0.21	+1.6
1,799,300	+		PfGW456L13_1637	0.27	-2.5
1,799,352	+		PfGW456L13_1637	0.35	-0.1
1,799,353	-		PfGW456L13_1637	0.36	+0.8
1,799,644	+		PfGW456L13_1637	0.83	+2.7
1,799,644	+		PfGW456L13_1637	0.83	-1.5
1,799,679	+		PfGW456L13_1637	0.88	-1.3
1,799,679	+		PfGW456L13_1637	0.88	+0.8
1,799,679	+		PfGW456L13_1637	0.88	-0.9
1,799,679	+		PfGW456L13_1637	0.88	+1.4
1,799,680	-		PfGW456L13_1637	0.89	+3.0
1,799,680	-		PfGW456L13_1637	0.89	+1.6
1,799,680	-		PfGW456L13_1637	0.89	+1.3
1,799,681	+		PfGW456L13_1637	0.89	-2.4
1,799,682	-		PfGW456L13_1637	0.89	+1.1
1,799,682	-				+0.1
1,799,682	-		PfGW456L13_1637	0.89	-0.9
1,799,755	+				-1.4
1,799,755	+				+0.4
1,799,785	+				-2.8
1,799,785	+				+0.2
1,799,786	-				-2.4
1,799,786	-				+2.2
1,799,786	-				+0.4
1,799,786	-				-2.8
1,799,804	-				-1.8
1,799,857	+		PfGW456L13_1638	0.22	+3.1
1,799,915	+		PfGW456L13_1638	0.36	+0.4
1,799,916	-		PfGW456L13_1638	0.36	-0.5
1,799,987	+		PfGW456L13_1638	0.53	+1.6
1,800,001	+		PfGW456L13_1638	0.57	+1.7
1,800,001	+		PfGW456L13_1638	0.57	+1.9
1,800,001	+		PfGW456L13_1638	0.57	-0.7
1,800,001	+		PfGW456L13_1638	0.57	+0.1
1,800,001	+		PfGW456L13_1638	0.57	+1.8
1,800,001	+		PfGW456L13_1638	0.57	-0.8
1,800,001	+		PfGW456L13_1638	0.57	-2.8
1,800,002	-		PfGW456L13_1638	0.57	-0.7
1,800,002	-		PfGW456L13_1638	0.57	-0.6
1,800,002	-		PfGW456L13_1638	0.57	-2.7
1,800,002	-		PfGW456L13_1638	0.57	-1.9
1,800,002	-		PfGW456L13_1638	0.57	+0.6
1,800,002	-		PfGW456L13_1638	0.57	-3.4
1,800,031	+		PfGW456L13_1638	0.64	-0.9
1,800,031	+		PfGW456L13_1638	0.64	-1.1
1,800,032	-		PfGW456L13_1638	0.64	-2.7
1,800,032	-		PfGW456L13_1638	0.64	+0.6
1,800,032	-		PfGW456L13_1638	0.64	-2.2
1,800,032	-		PfGW456L13_1638	0.64	-1.7
1,800,237	+				-1.6
1,800,237	+				-1.2
1,800,238	-				+0.4
1,800,238	-				-1.2
1,800,238	-				-0.1
1,800,332	-				+1.9
1,800,332	-				+0.1
1,800,340	+				+1.4
1,800,340	+				+1.2
1,800,340	+				-3.8
1,800,340	+				+1.3
1,800,340	+				-3.4
1,800,341	-				-2.4
1,800,341	-				-1.4
1,800,341	-				-1.5
1,800,341	-				+0.8
1,800,341	-				+0.7
1,800,354	+				-3.1
1,800,354	+				-1.4
1,800,355	-				+2.0
1,800,355	-				-0.5
1,800,355	-				+0.3
1,800,355	-				+1.3
1,800,451	-		PfGW456L13_1639	0.18	+0.7
1,800,451	-		PfGW456L13_1639	0.18	-3.8
1,800,473	+		PfGW456L13_1639	0.22	-0.9
1,800,473	+		PfGW456L13_1639	0.22	-1.5
1,800,473	+		PfGW456L13_1639	0.22	-0.7
1,800,473	+		PfGW456L13_1639	0.22	-3.1
1,800,473	+		PfGW456L13_1639	0.22	+2.1
1,800,474	-		PfGW456L13_1639	0.22	-2.9
1,800,474	-		PfGW456L13_1639	0.22	+0.5
1,800,474	-		PfGW456L13_1639	0.22	-2.1
1,800,474	-		PfGW456L13_1639	0.22	+2.3
1,800,474	-		PfGW456L13_1639	0.22	-1.8