Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1546

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
1,704,017	+		PfGW456L13_1544	0.47	-1.8
1,704,040	+		PfGW456L13_1544	0.50	-1.1
1,704,040	+		PfGW456L13_1544	0.50	-1.1
1,704,040	+		PfGW456L13_1544	0.50	+0.1
1,704,094	+		PfGW456L13_1544	0.58	-0.1
1,704,094	+		PfGW456L13_1544	0.58	+0.1
1,704,153	+		PfGW456L13_1544	0.67	-1.6
1,704,162	-		PfGW456L13_1544	0.69	-2.5
1,704,162	-		PfGW456L13_1544	0.69	-0.8
1,704,163	+		PfGW456L13_1544	0.69	-2.5
1,704,163	+		PfGW456L13_1544	0.69	-1.1
1,704,163	+		PfGW456L13_1544	0.69	-3.1
1,704,163	+		PfGW456L13_1544	0.69	-2.2
1,704,163	+		PfGW456L13_1544	0.69	-2.2
1,704,164	-		PfGW456L13_1544	0.69	-2.0
1,704,164	-		PfGW456L13_1544	0.69	-0.9
1,704,202	+		PfGW456L13_1544	0.75	-1.9
1,704,230	+		PfGW456L13_1544	0.79	-3.1
1,704,248	-		PfGW456L13_1544	0.82	-2.6
1,704,423	+		PfGW456L13_1545	0.11	+0.1
1,704,503	+		PfGW456L13_1545	0.24	-1.6
1,704,526	+		PfGW456L13_1545	0.27	-1.7
1,704,526	+		PfGW456L13_1545	0.27	-2.0
1,704,526	+		PfGW456L13_1545	0.27	-0.6
1,704,526	+		PfGW456L13_1545	0.27	-0.7
1,704,526	+		PfGW456L13_1545	0.27	-1.8
1,704,526	+		PfGW456L13_1545	0.27	-0.7
1,704,526	+		PfGW456L13_1545	0.27	-1.7
1,704,527	-		PfGW456L13_1545	0.28	-2.1
1,704,663	+		PfGW456L13_1545	0.49	-2.1
1,704,750	+		PfGW456L13_1545	0.63	-1.3
1,704,750	+		PfGW456L13_1545	0.63	-1.0
1,704,751	-		PfGW456L13_1545	0.63	-0.9
1,704,751	-		PfGW456L13_1545	0.63	-2.5
1,704,751	-		PfGW456L13_1545	0.63	-2.7
1,704,753	-		PfGW456L13_1545	0.64	-1.5
1,704,760	+		PfGW456L13_1545	0.65	-1.9
1,704,760	+		PfGW456L13_1545	0.65	-1.3
1,704,760	+		PfGW456L13_1545	0.65	-2.0
1,704,760	+		PfGW456L13_1545	0.65	-0.3
1,704,761	-		PfGW456L13_1545	0.65	-3.0
1,704,761	-		PfGW456L13_1545	0.65	-1.7
1,704,761	-		PfGW456L13_1545	0.65	+1.7
1,705,079	+				-1.9
1,705,079	+				-3.0
1,705,079	+				-2.0
1,705,079	+				-3.3
1,705,080	-				-2.8
1,705,082	-				-1.3
1,705,157	+				-3.2
1,705,157	+				-2.9
1,705,157	+				-2.2
1,705,157	+				-2.7
1,705,158	-				-1.0
1,705,159	+				+0.4
1,705,254	+		PfGW456L13_1546	0.12	-1.4
1,705,255	-		PfGW456L13_1546	0.12	-0.8
1,705,262	+		PfGW456L13_1546	0.13	-2.2
1,705,263	-		PfGW456L13_1546	0.13	-3.1
1,705,348	+		PfGW456L13_1546	0.16	-2.7
1,705,352	+		PfGW456L13_1546	0.17	-0.7
1,705,352	+		PfGW456L13_1546	0.17	-3.0
1,705,352	+		PfGW456L13_1546	0.17	+0.1
1,705,352	+		PfGW456L13_1546	0.17	-3.1
1,705,352	+		PfGW456L13_1546	0.17	-2.6
1,705,352	+		PfGW456L13_1546	0.17	-0.9
1,705,352	+		PfGW456L13_1546	0.17	-0.4
1,705,352	+		PfGW456L13_1546	0.17	-0.7
1,705,352	+		PfGW456L13_1546	0.17	-3.2
1,705,352	+		PfGW456L13_1546	0.17	-1.1
1,705,352	+		PfGW456L13_1546	0.17	-1.1
1,705,353	-		PfGW456L13_1546	0.17	-2.0
1,705,353	-		PfGW456L13_1546	0.17	-1.5
1,705,353	-		PfGW456L13_1546	0.17	-2.1
1,705,353	-		PfGW456L13_1546	0.17	-1.5
1,705,353	-		PfGW456L13_1546	0.17	-3.8
1,705,353	-		PfGW456L13_1546	0.17	-0.9
1,705,353	-		PfGW456L13_1546	0.17	-1.1
1,705,454	-		PfGW456L13_1546	0.21	-1.5
1,705,535	+		PfGW456L13_1546	0.24	-2.1
1,705,535	+		PfGW456L13_1546	0.24	-1.2
1,705,535	+		PfGW456L13_1546	0.24	-2.2
1,705,535	+		PfGW456L13_1546	0.24	-1.7
1,705,535	+		PfGW456L13_1546	0.24	-0.5
1,705,535	+		PfGW456L13_1546	0.24	-1.7
1,705,535	+		PfGW456L13_1546	0.24	-0.9
1,705,535	+		PfGW456L13_1546	0.24	-1.0
1,705,536	-		PfGW456L13_1546	0.25	-0.7
1,705,536	-		PfGW456L13_1546	0.25	-0.3
1,705,536	-		PfGW456L13_1546	0.25	-3.4
1,705,536	-		PfGW456L13_1546	0.25	-2.3
1,705,539	+		PfGW456L13_1546	0.25	-2.6
1,705,539	+		PfGW456L13_1546	0.25	-1.5
1,705,539	+		PfGW456L13_1546	0.25	-1.1
1,705,540	-		PfGW456L13_1546	0.25	-2.9
1,705,540	-		PfGW456L13_1546	0.25	-0.9
1,705,540	-		PfGW456L13_1546	0.25	-2.9
1,705,540	-		PfGW456L13_1546	0.25	-0.7
1,705,540	-		PfGW456L13_1546	0.25	-2.5
1,705,593	-		PfGW456L13_1546	0.27	-0.7
1,705,781	+		PfGW456L13_1546	0.35	-1.9
1,705,782	-		PfGW456L13_1546	0.35	-1.2
1,705,874	+		PfGW456L13_1546	0.39	-2.9
1,705,875	-		PfGW456L13_1546	0.39	-1.8
1,705,875	-		PfGW456L13_1546	0.39	-2.6
1,705,875	-		PfGW456L13_1546	0.39	-0.1
1,705,883	-		PfGW456L13_1546	0.40	-2.7
1,705,973	+		PfGW456L13_1546	0.43	-0.3
1,706,063	+		PfGW456L13_1546	0.47	-2.8
1,706,063	+		PfGW456L13_1546	0.47	-1.3
1,706,063	+		PfGW456L13_1546	0.47	-2.4
1,706,063	+		PfGW456L13_1546	0.47	-1.6
1,706,063	+		PfGW456L13_1546	0.47	-3.1
1,706,063	+		PfGW456L13_1546	0.47	+1.7
1,706,064	-		PfGW456L13_1546	0.47	-1.2
1,706,064	-		PfGW456L13_1546	0.47	-2.8
1,706,064	-		PfGW456L13_1546	0.47	-3.0
1,706,064	-		PfGW456L13_1546	0.47	-2.4
1,706,064	-		PfGW456L13_1546	0.47	-2.0
1,706,252	+		PfGW456L13_1546	0.56	-0.7
1,706,252	+		PfGW456L13_1546	0.56	-1.4
1,706,252	+		PfGW456L13_1546	0.56	-1.8
1,706,252	+		PfGW456L13_1546	0.56	-1.7
1,706,253	-				+1.7
1,706,309	+		PfGW456L13_1546	0.58	-1.7
1,706,310	-				+0.1
1,706,310	-		PfGW456L13_1546	0.58	-2.4
1,706,476	+		PfGW456L13_1546	0.65	-2.5
1,706,477	-		PfGW456L13_1546	0.65	-1.5
1,706,477	-		PfGW456L13_1546	0.65	-0.9
1,706,477	-		PfGW456L13_1546	0.65	-1.7
1,706,777	+		PfGW456L13_1546	0.78	-2.8
1,706,777	+		PfGW456L13_1546	0.78	-2.0
1,706,777	+		PfGW456L13_1546	0.78	-1.9
1,706,777	+		PfGW456L13_1546	0.78	-2.7
1,706,778	-		PfGW456L13_1546	0.78	-2.0
1,706,778	-		PfGW456L13_1546	0.78	-2.1
1,706,787	+				+0.7
1,706,788	-		PfGW456L13_1546	0.79	-1.5
1,707,023	+		PfGW456L13_1546	0.89	-2.9
1,707,024	-		PfGW456L13_1546	0.89	-0.7
1,707,269	-				-0.1
1,707,272	+				+2.1
1,707,272	+				-2.7
1,707,348	+				+0.9
1,707,348	+				-2.1
1,707,348	+				-3.7
1,707,349	-				-2.3
1,707,362	+				-0.4
1,707,362	+				-3.2
1,707,363	-				-2.9
1,707,363	-				-3.7
1,707,363	-				+1.6
1,707,363	-				-2.5
1,707,409	+				-0.5
1,707,409	+				+0.6
1,707,410	-				+1.7
1,707,422	+				-2.8
1,707,423	-				-1.1
1,707,423	-				-0.3
1,707,423	-				+3.6
1,707,460	+				+1.7
1,707,460	+				-1.7
1,707,460	+				-1.8
1,707,461	-				+0.5
1,707,553	+				+2.9
1,707,553	+				+0.1
1,707,553	+				+0.9
1,707,554	-				+0.7
1,707,554	-				+2.2
1,707,554	-				+0.1
1,707,554	-				+0.0
1,707,577	+				+0.4
1,707,577	+				+1.2
1,707,577	+				-0.5
1,707,577	+				+0.9
1,707,577	+				+0.4
1,707,578	-				-2.5
1,707,578	-				-1.1
1,707,578	-				-1.5
1,707,578	-				-3.8
1,707,578	-				-2.4
1,707,578	-				+0.4
1,707,581	+				+1.1
1,707,736	+				-1.5
1,707,737	-				-1.2
1,707,737	-				-3.5
1,707,737	-				+0.2
1,707,737	-				+0.6
1,707,737	-				+1.8
1,707,739	+				-0.7
1,707,740	-				-1.5
1,707,793	+		PfGW456L13_1547	0.11	-3.1
1,707,793	+		PfGW456L13_1547	0.11	+0.6
1,707,793	+		PfGW456L13_1547	0.11	+1.4
1,707,793	+		PfGW456L13_1547	0.11	+0.1
1,707,793	+		PfGW456L13_1547	0.11	+0.8
1,707,793	+		PfGW456L13_1547	0.11	-2.6
1,707,793	+		PfGW456L13_1547	0.11	+0.4
1,707,793	+		PfGW456L13_1547	0.11	+0.6
1,707,794	-		PfGW456L13_1547	0.11	-2.7
1,707,794	-		PfGW456L13_1547	0.11	+1.0
1,707,794	-		PfGW456L13_1547	0.11	-0.3
1,707,794	-		PfGW456L13_1547	0.11	-0.9
1,707,794	-		PfGW456L13_1547	0.11	+1.8
1,707,794	-		PfGW456L13_1547	0.11	-2.4
1,707,794	-		PfGW456L13_1547	0.11	-2.9
1,707,794	-		PfGW456L13_1547	0.11	-2.2
1,707,794	-		PfGW456L13_1547	0.11	+2.5
1,707,794	-		PfGW456L13_1547	0.11	+0.3
1,707,961	+		PfGW456L13_1547	0.17	+1.0
1,707,962	-		PfGW456L13_1547	0.17	+1.2
1,707,962	-		PfGW456L13_1547	0.17	+2.7
1,707,962	-		PfGW456L13_1547	0.17	+0.7
1,707,962	-		PfGW456L13_1547	0.17	-3.1
1,707,962	-		PfGW456L13_1547	0.17	+0.1
1,707,962	-		PfGW456L13_1547	0.17	-2.4
1,707,962	-		PfGW456L13_1547	0.17	-0.9
1,708,042	+		PfGW456L13_1547	0.20	+1.0
1,708,190	-		PfGW456L13_1547	0.25	+0.3
1,708,190	-		PfGW456L13_1547	0.25	+1.3
1,708,190	-		PfGW456L13_1547	0.25	-3.7