Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1289

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
1,427,220	+		PfGW456L13_1287	0.78	-1.0
1,427,220	+		PfGW456L13_1287	0.78	+1.7
1,427,220	+		PfGW456L13_1287	0.78	+1.1
1,427,220	+		PfGW456L13_1287	0.78	+1.1
1,427,220	+		PfGW456L13_1287	0.78	+1.5
1,427,220	+		PfGW456L13_1287	0.78	-0.0
1,427,221	-		PfGW456L13_1287	0.78	+1.3
1,427,221	-		PfGW456L13_1287	0.78	-2.9
1,427,221	-		PfGW456L13_1287	0.78	-0.9
1,427,221	-		PfGW456L13_1287	0.78	+2.6
1,427,221	-		PfGW456L13_1287	0.78	-2.1
1,427,221	-		PfGW456L13_1287	0.78	+1.4
1,427,221	-		PfGW456L13_1287	0.78	-3.7
1,427,221	-		PfGW456L13_1287	0.78	-2.0
1,427,221	-		PfGW456L13_1287	0.78	+0.4
1,427,241	+		PfGW456L13_1287	0.82	+2.3
1,427,241	+		PfGW456L13_1287	0.82	+1.2
1,427,242	-		PfGW456L13_1287	0.82	-0.2
1,427,242	-		PfGW456L13_1287	0.82	+2.4
1,427,250	+		PfGW456L13_1287	0.84	-0.4
1,427,250	+		PfGW456L13_1287	0.84	+0.4
1,427,250	+		PfGW456L13_1287	0.84	+0.9
1,427,251	-		PfGW456L13_1287	0.84	-3.5
1,427,251	-		PfGW456L13_1287	0.84	-0.2
1,427,251	-		PfGW456L13_1287	0.84	-1.4
1,427,314	+				-2.8
1,427,314	+				+0.7
1,427,391	-				+2.4
1,427,391	-				+1.7
1,427,487	+				+0.6
1,427,487	+				+0.9
1,427,488	-				+1.2
1,427,488	-				+0.4
1,427,488	-				+0.1
1,427,488	-				+0.7
1,427,546	-				-2.6
1,427,552	+				-0.8
1,427,552	+				-2.4
1,427,553	-				-1.3
1,427,576	+				+1.4
1,427,576	+				-2.5
1,427,576	+				+1.6
1,427,576	+				+1.9
1,427,577	-				-0.1
1,427,577	-				+1.5
1,427,604	-				+0.7
1,427,604	-				-2.3
1,427,604	-				+1.2
1,427,715	+		PfGW456L13_1288	0.29	-0.1
1,427,715	+		PfGW456L13_1288	0.29	-2.9
1,427,715	+		PfGW456L13_1288	0.29	+1.3
1,427,716	-		PfGW456L13_1288	0.29	-3.1
1,428,068	+				-1.3
1,428,068	+				+2.5
1,428,068	+				-1.7
1,428,069	-				-3.7
1,428,069	-				+1.7
1,428,069	-				+0.7
1,428,088	+				-2.3
1,428,089	-				+1.5
1,428,150	+				-2.3
1,428,150	+				+1.2
1,428,150	+				+1.7
1,428,151	-				-0.4
1,428,151	-				+0.3
1,428,151	-				-0.6
1,428,151	-				+0.3
1,428,151	-				-2.1
1,428,193	+				+1.7
1,428,193	+				-3.5
1,428,193	+				+0.9
1,428,193	+				+1.1
1,428,193	+				-0.8
1,428,193	+				+1.3
1,428,193	+				+0.9
1,428,193	+				-3.0
1,428,193	+				-1.2
1,428,193	+				-3.1
1,428,193	+				-3.3
1,428,193	+				-1.6
1,428,193	+				-2.7
1,428,193	+				-4.2
1,428,193	+				+0.3
1,428,193	+				+0.8
1,428,193	+				-0.8
1,428,194	-				+1.8
1,428,194	-				+2.3
1,428,194	-				+0.2
1,428,194	-				-0.8
1,428,194	-				-2.5
1,428,194	-				+1.5
1,428,247	+				+2.4
1,428,247	+				-0.5
1,428,247	+				+0.6
1,428,248	-				-0.1
1,428,248	-				-0.4
1,428,248	-				-2.2
1,428,248	-				+0.6
1,428,255	+				+2.3
1,428,256	-				-1.0
1,428,564	-		PfGW456L13_1289	0.35	+2.4
1,428,564	-		PfGW456L13_1289	0.35	+0.2
1,428,599	+		PfGW456L13_1289	0.39	+2.5
1,428,600	-		PfGW456L13_1289	0.39	+1.6
1,428,767	+		PfGW456L13_1289	0.56	+1.7
1,428,767	+		PfGW456L13_1289	0.56	+1.1
1,428,768	-		PfGW456L13_1289	0.56	-2.0
1,429,012	-		PfGW456L13_1289	0.80	-2.7
1,429,098	+		PfGW456L13_1289	0.89	-2.5
1,429,248	+				-3.0
1,429,249	-				-1.6
1,429,263	+				+3.6
1,429,263	+				-1.3
1,429,263	+				+2.5
1,429,263	+				+1.7
1,429,264	-				-2.2
1,429,264	-				+1.5
1,429,264	-				+0.6
1,429,264	-				-0.8
1,429,267	+				+0.5
1,429,267	+				+1.5
1,429,267	+				-0.2
1,429,267	+				-1.2
1,429,267	+				-0.4
1,429,267	+				+2.9
1,429,267	+				+1.2
1,429,267	+				+2.6
1,429,268	-				+1.9
1,429,268	-				-4.1
1,429,268	-				+1.3
1,429,268	-				+1.3
1,429,268	-				-1.7
1,429,268	-				-1.4
1,429,268	-				-0.3
1,429,268	-				-2.8
1,429,268	-				-0.4
1,429,268	-				+1.2
1,429,268	-				+1.7
1,429,268	-				+2.3
1,429,268	-				-0.2
1,429,354	+				-0.4
1,429,355	-				-0.4
1,429,355	-				+0.2
1,429,420	+				+0.8
1,429,473	+		PfGW456L13_1290	0.43	-0.7
1,429,473	+		PfGW456L13_1290	0.43	+2.4
1,429,473	+		PfGW456L13_1290	0.43	+0.1
1,429,473	+		PfGW456L13_1290	0.43	+0.0
1,429,473	+		PfGW456L13_1290	0.43	+1.7
1,429,473	+		PfGW456L13_1290	0.43	+0.4
1,429,473	+		PfGW456L13_1290	0.43	+3.4
1,429,474	-		PfGW456L13_1290	0.44	-1.6
1,429,474	-		PfGW456L13_1290	0.44	+1.7
1,429,474	-		PfGW456L13_1290	0.44	+1.8
1,429,474	-		PfGW456L13_1290	0.44	-2.6
1,429,474	-		PfGW456L13_1290	0.44	+1.2
1,429,474	-		PfGW456L13_1290	0.44	+2.0
1,429,474	-		PfGW456L13_1290	0.44	-1.2
1,429,474	-		PfGW456L13_1290	0.44	-0.0
1,429,474	-		PfGW456L13_1290	0.44	+1.1
1,429,474	-		PfGW456L13_1290	0.44	+1.3
1,429,615	+				-0.2
1,429,615	+				+1.0
1,429,629	+				-0.6
1,429,630	-				+2.0
1,429,641	+				-0.7
1,429,642	-		PfGW456L13_1291	0.10	+2.7
1,429,675	-		PfGW456L13_1291	0.13	-1.6
1,429,675	-		PfGW456L13_1291	0.13	+1.9
1,429,758	+		PfGW456L13_1291	0.21	-0.8
1,429,759	-		PfGW456L13_1291	0.21	+0.9
1,429,935	+		PfGW456L13_1291	0.37	+1.7
1,429,936	-		PfGW456L13_1291	0.37	-0.8
1,430,120	+		PfGW456L13_1291	0.54	-2.3
1,430,142	+		PfGW456L13_1291	0.56	-0.7
1,430,143	-		PfGW456L13_1291	0.56	-3.3
1,430,157	+		PfGW456L13_1291	0.58	-0.3
1,430,157	+		PfGW456L13_1291	0.58	-0.7
1,430,157	+		PfGW456L13_1291	0.58	+1.1
1,430,157	+		PfGW456L13_1291	0.58	+0.7
1,430,157	+		PfGW456L13_1291	0.58	-1.0
1,430,157	+		PfGW456L13_1291	0.58	+0.6
1,430,157	+		PfGW456L13_1291	0.58	-2.3
1,430,157	+		PfGW456L13_1291	0.58	+1.6
1,430,157	+		PfGW456L13_1291	0.58	-0.4
1,430,157	+		PfGW456L13_1291	0.58	-1.1
1,430,157	+		PfGW456L13_1291	0.58	+1.7
1,430,157	+		PfGW456L13_1291	0.58	-1.4
1,430,158	-		PfGW456L13_1291	0.58	-2.5
1,430,158	-		PfGW456L13_1291	0.58	-2.3
1,430,191	-		PfGW456L13_1291	0.61	-0.4
1,430,191	-		PfGW456L13_1291	0.61	-0.5
1,430,191	-		PfGW456L13_1291	0.61	+2.0
1,430,191	-		PfGW456L13_1291	0.61	+0.1
1,430,191	-		PfGW456L13_1291	0.61	-3.9
1,430,191	-		PfGW456L13_1291	0.61	+0.3