Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1178

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
1,308,506	-				-2.0
1,308,565	+				+3.0
1,308,565	+				+1.3
1,308,565	+				+1.2
1,308,565	+				-2.3
1,308,566	-				-2.1
1,308,566	-				+1.3
1,308,627	+		PfGW456L13_1177	0.20	-1.7
1,308,627	+		PfGW456L13_1177	0.20	-0.4
1,308,627	+		PfGW456L13_1177	0.20	+2.2
1,308,627	+		PfGW456L13_1177	0.20	+0.8
1,308,667	+		PfGW456L13_1177	0.32	+1.1
1,308,667	+		PfGW456L13_1177	0.32	+1.7
1,308,820	+		PfGW456L13_1177	0.80	-4.3
1,308,820	+		PfGW456L13_1177	0.80	-1.8
1,308,820	+		PfGW456L13_1177	0.80	+3.0
1,308,821	-		PfGW456L13_1177	0.80	-0.9
1,308,890	+				-0.0
1,308,891	-				+0.7
1,308,891	-				+2.1
1,308,891	-				-0.1
1,308,903	+				-0.2
1,308,904	-				+1.5
1,308,946	+				+1.2
1,308,946	+				+0.5
1,308,946	+				+0.2
1,308,947	-				+1.9
1,308,947	-				-1.6
1,308,947	-				-0.3
1,308,947	-				+3.7
1,308,947	-				-1.2
1,308,971	+				-1.0
1,308,972	-				-1.0
1,308,972	-				-2.8
1,308,972	-				+0.6
1,309,013	+				+0.4
1,309,014	-				+0.5
1,309,014	-				-0.2
1,309,014	-				-1.9
1,309,014	-				-2.0
1,309,014	-				+1.8
1,309,031	+				+0.0
1,309,031	+				+1.7
1,309,031	+				+1.2
1,309,031	+				+1.1
1,309,031	+				-2.2
1,309,031	+				+2.7
1,309,031	+				-1.7
1,309,031	+				+0.8
1,309,031	+				+0.3
1,309,032	-				+0.4
1,309,032	-				-4.2
1,309,032	-				+1.3
1,309,120	+				+1.2
1,309,121	-				+0.4
1,309,121	-				+3.1
1,309,164	+				+2.2
1,309,164	+				-0.2
1,309,164	+				-2.1
1,309,164	+				+2.0
1,309,184	+				+2.8
1,309,184	+				+1.3
1,309,184	+				-1.5
1,309,184	+				+0.5
1,309,185	-				-0.5
1,309,185	-				-2.0
1,309,222	+				+0.3
1,309,222	+				-2.4
1,309,222	+				+0.4
1,309,222	+				-2.9
1,309,222	+				-2.3
1,309,222	+				+0.9
1,309,222	+				-0.9
1,309,222	+				+0.3
1,309,222	+				-3.2
1,309,222	+				-0.4
1,309,223	-				+2.0
1,309,223	-				-0.8
1,309,223	-				-3.2
1,309,223	-				+0.4
1,309,223	-				-2.4
1,309,223	-				-1.4
1,309,237	-				+1.6
1,309,367	+				+1.6
1,309,381	-				-0.5
1,309,437	-				+0.8
1,309,464	+				-0.5
1,309,464	+				-2.3
1,309,522	+				-2.7
1,309,523	-				+0.1
1,309,523	-				-2.7
1,309,568	+				-3.1
1,309,643	+		PfGW456L13_1178	0.12	+0.1
1,309,644	-		PfGW456L13_1178	0.12	-3.2
1,309,687	+		PfGW456L13_1178	0.15	-0.9
1,309,850	+		PfGW456L13_1178	0.28	+1.9
1,309,851	-		PfGW456L13_1178	0.28	-1.4
1,309,890	-		PfGW456L13_1178	0.31	+0.4
1,310,046	+		PfGW456L13_1178	0.43	-0.2
1,310,046	+		PfGW456L13_1178	0.43	+1.4
1,310,120	+		PfGW456L13_1178	0.48	-2.6
1,310,121	-		PfGW456L13_1178	0.48	-1.9
1,310,175	+		PfGW456L13_1178	0.53	-1.3
1,310,176	-		PfGW456L13_1178	0.53	+3.1
1,310,208	+		PfGW456L13_1178	0.55	-0.6
1,310,220	+		PfGW456L13_1178	0.56	+0.6
1,310,220	+		PfGW456L13_1178	0.56	-0.7
1,310,220	+		PfGW456L13_1178	0.56	-2.4
1,310,220	+		PfGW456L13_1178	0.56	+0.3
1,310,221	-		PfGW456L13_1178	0.56	+1.3
1,310,221	-		PfGW456L13_1178	0.56	+0.5
1,310,273	+		PfGW456L13_1178	0.60	-3.7
1,310,273	+		PfGW456L13_1178	0.60	-2.1
1,310,429	+		PfGW456L13_1178	0.72	-1.1
1,310,429	+		PfGW456L13_1178	0.72	+1.4
1,310,429	+		PfGW456L13_1178	0.72	+0.0
1,310,429	+		PfGW456L13_1178	0.72	-0.9
1,310,430	-		PfGW456L13_1178	0.72	+3.2
1,310,430	-		PfGW456L13_1178	0.72	+0.7
1,310,430	-		PfGW456L13_1178	0.72	-2.6
1,310,430	-		PfGW456L13_1178	0.72	+0.6
1,310,430	-		PfGW456L13_1178	0.72	+0.7
1,310,430	-		PfGW456L13_1178	0.72	+0.6
1,310,430	-		PfGW456L13_1178	0.72	+0.2
1,310,430	-		PfGW456L13_1178	0.72	+3.2
1,310,430	-		PfGW456L13_1178	0.72	+1.5
1,310,430	-		PfGW456L13_1178	0.72	-2.9
1,310,475	+		PfGW456L13_1178	0.75	-1.0
1,310,476	-		PfGW456L13_1178	0.75	+2.8
1,310,656	+		PfGW456L13_1178	0.89	-3.2
1,310,657	-		PfGW456L13_1178	0.89	-0.4
1,310,678	+				-0.7
1,310,678	+				-2.5
1,310,795	+				-2.9
1,310,795	+				+0.9
1,310,795	+				-1.0
1,310,795	+				+0.8
1,310,795	+				-0.1
1,310,796	-				-0.4
1,310,796	-				-0.9
1,310,796	-				+2.6
1,310,862	+				-1.7
1,310,862	+				-1.5
1,310,863	-				+1.6
1,310,867	+				+4.7
1,310,975	+				+1.3
1,310,975	+				+0.7
1,310,975	+				-1.2
1,310,975	+				-1.5
1,310,976	-				-2.2
1,310,976	-				-0.3
1,310,976	-				-0.1
1,310,976	-				+1.0
1,311,023	+				-1.3
1,311,024	-				-0.3
1,311,082	-				-0.9
1,311,128	+				-1.4
1,311,128	+				-0.4
1,311,128	+				-2.0
1,311,129	-				+2.5
1,311,129	-				+0.3
1,311,177	+				-2.9
1,311,177	+				-1.0
1,311,177	+				-1.0
1,311,177	+				-1.5
1,311,178	-				+0.0
1,311,178	-				-0.5
1,311,178	-				-0.1
1,311,178	-				-0.1
1,311,178	-				-2.6
1,311,186	+				+0.6
1,311,186	+				-1.5
1,311,276	+				-1.7
1,311,277	-				+1.8
1,311,277	-				+2.3
1,311,277	-				+1.0
1,311,280	+				-0.2
1,311,281	-				+1.9
1,311,281	-				-1.9
1,311,303	-				+1.0
1,311,303	-				+1.0
1,311,303	-				+2.5
1,311,303	-				+0.7
1,311,307	-				-2.6
1,311,327	+				-2.1
1,311,327	+				+0.3
1,311,327	+				-2.2
1,311,327	+				-2.8
1,311,327	+				+0.5
1,311,328	-				-1.2
1,311,328	-				+1.0
1,311,328	-				+1.9
1,311,328	-				+0.2
1,311,328	-				-2.6
1,311,369	+				-2.4
1,311,370	-				-1.8
1,311,370	-				-1.4
1,311,494	+				+0.4
1,311,494	+				+1.5
1,311,495	-				-1.7
1,311,547	+				-2.2
1,311,547	+				+0.2
1,311,547	+				-3.9
1,311,548	-				+1.1
1,311,548	-				+2.2
1,311,656	-				+1.4
1,311,668	+				-1.7
1,311,669	-				+1.3
1,311,670	+				-0.8
1,311,670	+				+0.5
1,311,756	+				+2.3
1,311,782	+				-0.8
1,311,783	-				+0.5
1,311,783	-				+0.9