Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_12765 and PS417_12770 are separated by 11 nucleotides PS417_12770 and PS417_12775 overlap by 4 nucleotides PS417_12775 and PS417_12780 are separated by 51 nucleotides
PS417_12765: PS417_12765 - oxidoreductase, at 2,789,435 to 2,790,181
_12765
PS417_12770: PS417_12770 - hypothetical protein, at 2,790,193 to 2,790,477
_12770
PS417_12775: PS417_12775 - GntR family transcriptional regulator, at 2,790,474 to 2,791,883
_12775
PS417_12780: PS417_12780 - (Fe-S)-binding protein, at 2,791,935 to 2,793,344
_12780
Position (kb)
2790
2791
2792 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2789.531 kb on + strand, within PS417_12765 at 2789.531 kb on + strand, within PS417_12765 at 2789.531 kb on + strand, within PS417_12765 at 2789.894 kb on + strand, within PS417_12765 at 2789.895 kb on - strand, within PS417_12765 at 2790.113 kb on - strand at 2790.194 kb on + strand at 2790.195 kb on - strand at 2790.195 kb on - strand at 2790.195 kb on - strand at 2790.202 kb on + strand at 2790.203 kb on - strand at 2790.203 kb on - strand at 2790.203 kb on - strand at 2790.203 kb on - strand at 2790.221 kb on + strand at 2790.367 kb on + strand, within PS417_12770 at 2790.368 kb on - strand, within PS417_12770 at 2790.492 kb on - strand at 2790.545 kb on - strand at 2790.545 kb on - strand at 2790.682 kb on + strand, within PS417_12775 at 2790.817 kb on + strand at 2791.033 kb on + strand, within PS417_12775 at 2791.072 kb on - strand, within PS417_12775 at 2791.072 kb on - strand, within PS417_12775 at 2791.072 kb on - strand, within PS417_12775 at 2791.532 kb on + strand, within PS417_12775 at 2791.533 kb on - strand, within PS417_12775 at 2791.741 kb on + strand, within PS417_12775 at 2791.741 kb on + strand at 2791.741 kb on + strand, within PS417_12775 at 2791.742 kb on - strand, within PS417_12775 at 2791.744 kb on + strand at 2791.744 kb on + strand at 2791.745 kb on - strand at 2791.745 kb on - strand at 2791.777 kb on + strand at 2791.777 kb on + strand at 2791.919 kb on + strand at 2791.978 kb on + strand at 2791.978 kb on + strand at 2792.070 kb on + strand at 2792.070 kb on + strand at 2792.070 kb on + strand at 2792.070 kb on + strand at 2792.071 kb on - strand at 2792.197 kb on + strand, within PS417_12780 at 2792.198 kb on - strand, within PS417_12780 at 2792.392 kb on + strand, within PS417_12780 at 2792.650 kb on - strand, within PS417_12780 at 2792.650 kb on - strand, within PS417_12780 at 2792.719 kb on + strand, within PS417_12780 at 2792.719 kb on + strand, within PS417_12780 at 2792.720 kb on - strand, within PS417_12780 at 2792.720 kb on - strand, within PS417_12780
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 2,789,531 + PS417_12765 0.13 -0.1 2,789,531 + PS417_12765 0.13 +0.4 2,789,531 + PS417_12765 0.13 -0.6 2,789,894 + PS417_12765 0.61 +1.2 2,789,895 - PS417_12765 0.62 +0.0 2,790,113 - +1.6 2,790,194 + +0.6 2,790,195 - +0.3 2,790,195 - -0.0 2,790,195 - +2.1 2,790,202 + +0.2 2,790,203 - +1.0 2,790,203 - +0.0 2,790,203 - -0.5 2,790,203 - -0.3 2,790,221 + -0.4 2,790,367 + PS417_12770 0.61 -0.3 2,790,368 - PS417_12770 0.61 -1.8 2,790,492 - +1.6 2,790,545 - -0.2 2,790,545 - +0.8 2,790,682 + PS417_12775 0.15 -0.1 2,790,817 + +2.1 2,791,033 + PS417_12775 0.40 -0.2 2,791,072 - PS417_12775 0.42 -1.0 2,791,072 - PS417_12775 0.42 -0.7 2,791,072 - PS417_12775 0.42 +0.6 2,791,532 + PS417_12775 0.75 -1.3 2,791,533 - PS417_12775 0.75 -0.6 2,791,741 + PS417_12775 0.90 +1.6 2,791,741 + -0.4 2,791,741 + PS417_12775 0.90 +0.4 2,791,742 - PS417_12775 0.90 +1.0 2,791,744 + +1.1 2,791,744 + -1.0 2,791,745 - +0.4 2,791,745 - +1.1 2,791,777 + +0.1 2,791,777 + +0.1 2,791,919 + +0.1 2,791,978 + +0.3 2,791,978 + -0.0 2,792,070 + +0.3 2,792,070 + -1.0 2,792,070 + -0.7 2,792,070 + +0.4 2,792,071 - -0.1 2,792,197 + PS417_12780 0.19 -0.5 2,792,198 - PS417_12780 0.19 -0.6 2,792,392 + PS417_12780 0.32 +0.7 2,792,650 - PS417_12780 0.51 -2.0 2,792,650 - PS417_12780 0.51 +0.6 2,792,719 + PS417_12780 0.56 -0.2 2,792,719 + PS417_12780 0.56 -0.4 2,792,720 - PS417_12780 0.56 -0.9 2,792,720 - PS417_12780 0.56 +0.4
Or see this region's nucleotide sequence