Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_07350 and PS417_07355 are separated by 112 nucleotides PS417_07355 and PS417_07360 overlap by 26 nucleotides PS417_07360 and PS417_07365 are separated by 343 nucleotides
PS417_07350: PS417_07350 - carbonic anhydrase, at 1,619,824 to 1,620,456
_07350
PS417_07355: PS417_07355 - transcriptional regulator, at 1,620,569 to 1,621,435
_07355
PS417_07360: PS417_07360 - ArtI protein, at 1,621,410 to 1,622,183
_07360
PS417_07365: PS417_07365 - glutamine synthetase, at 1,622,527 to 1,623,897
_07365
Position (kb)
1621
1622
1623 Strain fitness (log2 ratio)
-2
-1
0
1 at 1620.510 kb on - strand at 1620.552 kb on + strand at 1620.553 kb on - strand at 1620.758 kb on + strand, within PS417_07355 at 1620.758 kb on + strand, within PS417_07355 at 1620.758 kb on + strand, within PS417_07355 at 1620.758 kb on + strand, within PS417_07355 at 1620.758 kb on + strand, within PS417_07355 at 1620.759 kb on - strand, within PS417_07355 at 1620.759 kb on - strand, within PS417_07355 at 1621.010 kb on - strand, within PS417_07355 at 1621.161 kb on - strand, within PS417_07355 at 1621.172 kb on + strand, within PS417_07355 at 1621.172 kb on + strand, within PS417_07355 at 1621.173 kb on - strand, within PS417_07355 at 1621.192 kb on - strand, within PS417_07355 at 1621.448 kb on - strand at 1621.540 kb on + strand, within PS417_07360 at 1621.540 kb on + strand, within PS417_07360 at 1622.020 kb on + strand, within PS417_07360 at 1622.021 kb on - strand, within PS417_07360 at 1622.021 kb on - strand, within PS417_07360 at 1622.048 kb on - strand, within PS417_07360 at 1622.048 kb on - strand, within PS417_07360 at 1622.221 kb on - strand at 1622.300 kb on - strand at 1622.339 kb on - strand at 1622.460 kb on - strand at 1622.460 kb on - strand at 1622.511 kb on - strand at 1622.514 kb on + strand at 1622.514 kb on + strand at 1622.514 kb on + strand at 1622.514 kb on + strand at 1622.514 kb on + strand at 1622.515 kb on - strand at 1622.668 kb on + strand, within PS417_07365 at 1622.668 kb on + strand, within PS417_07365 at 1622.968 kb on + strand, within PS417_07365 at 1622.968 kb on + strand, within PS417_07365 at 1622.969 kb on - strand, within PS417_07365 at 1622.969 kb on - strand, within PS417_07365 at 1622.969 kb on - strand, within PS417_07365 at 1623.178 kb on - strand, within PS417_07365
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 1,620,510 - +0.4 1,620,552 + -1.0 1,620,553 - +0.9 1,620,758 + PS417_07355 0.22 -1.8 1,620,758 + PS417_07355 0.22 -0.2 1,620,758 + PS417_07355 0.22 +1.0 1,620,758 + PS417_07355 0.22 -0.3 1,620,758 + PS417_07355 0.22 -0.2 1,620,759 - PS417_07355 0.22 -0.1 1,620,759 - PS417_07355 0.22 +0.1 1,621,010 - PS417_07355 0.51 -0.3 1,621,161 - PS417_07355 0.68 -1.1 1,621,172 + PS417_07355 0.70 -0.8 1,621,172 + PS417_07355 0.70 +0.5 1,621,173 - PS417_07355 0.70 +0.1 1,621,192 - PS417_07355 0.72 +0.1 1,621,448 - +0.2 1,621,540 + PS417_07360 0.17 +0.6 1,621,540 + PS417_07360 0.17 +0.2 1,622,020 + PS417_07360 0.79 +0.2 1,622,021 - PS417_07360 0.79 +0.2 1,622,021 - PS417_07360 0.79 -0.9 1,622,048 - PS417_07360 0.82 -0.5 1,622,048 - PS417_07360 0.82 -0.0 1,622,221 - +0.6 1,622,300 - +1.7 1,622,339 - -0.9 1,622,460 - -0.2 1,622,460 - +0.2 1,622,511 - -0.2 1,622,514 + +0.6 1,622,514 + -0.4 1,622,514 + +0.7 1,622,514 + -0.6 1,622,514 + -0.0 1,622,515 - -1.3 1,622,668 + PS417_07365 0.10 +0.2 1,622,668 + PS417_07365 0.10 +0.0 1,622,968 + PS417_07365 0.32 +1.2 1,622,968 + PS417_07365 0.32 -1.0 1,622,969 - PS417_07365 0.32 +1.7 1,622,969 - PS417_07365 0.32 -0.2 1,622,969 - PS417_07365 0.32 -0.1 1,623,178 - PS417_07365 0.47 -0.5
Or see this region's nucleotide sequence