Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3740

Experiment: m.b. Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.001 mg/ml
4,451,929	-		Echvi_3738	0.81	+0.5
4,451,979	-		Echvi_3738	0.85	-0.2
4,451,979	-		Echvi_3738	0.85	+0.3
4,452,052	+				+0.1
4,452,053	-				-0.1
4,452,059	-				+0.1
4,452,097	-				+0.6
4,452,097	-				+0.8
4,452,130	+				+0.8
4,452,131	-				-0.6
4,452,131	-				+0.4
4,452,131	-				-0.1
4,452,131	-				-1.9
4,452,131	-				-0.4
4,452,131	-				-0.8
4,452,136	-				+0.1
4,452,144	-				+0.6
4,452,144	-				-0.4
4,452,146	+				+0.6
4,452,146	+				-0.4
4,452,146	+				-0.9
4,452,146	+				-1.2
4,452,151	+				+1.6
4,452,152	-				-0.4
4,452,152	-				+0.5
4,452,152	-				+1.0
4,452,197	+				-1.2
4,452,222	+		Echvi_3739	0.12	+0.5
4,452,222	+		Echvi_3739	0.12	+1.0
4,452,223	-		Echvi_3739	0.12	-1.5
4,452,227	-		Echvi_3739	0.13	-0.2
4,452,299	+		Echvi_3739	0.30	-1.1
4,452,306	+		Echvi_3739	0.32	+0.4
4,452,344	+		Echvi_3739	0.41	-0.8
4,452,365	+		Echvi_3739	0.46	+0.6
4,452,365	+		Echvi_3739	0.46	-0.1
4,452,366	-		Echvi_3739	0.46	+0.2
4,452,366	-		Echvi_3739	0.46	-1.6
4,452,366	-		Echvi_3739	0.46	+0.3
4,452,366	-		Echvi_3739	0.46	+0.3
4,452,366	-		Echvi_3739	0.46	+0.3
4,452,411	+		Echvi_3739	0.57	-1.1
4,452,533	+		Echvi_3739	0.86	-0.3
4,452,574	-				-0.7
4,452,614	-				-1.8
4,452,648	+				+0.1
4,452,663	+				-0.5
4,452,669	+				-0.6
4,452,670	-				-0.8
4,452,778	-				-0.4
4,452,994	+				-1.9
4,452,994	+				-2.4
4,453,125	-				-1.6
4,453,258	-		Echvi_3740	0.11	-2.2
4,453,299	-		Echvi_3740	0.12	-1.4
4,453,299	-		Echvi_3740	0.12	-3.2
4,453,365	+		Echvi_3740	0.14	-1.4
4,453,365	+		Echvi_3740	0.14	-3.1
4,453,396	+		Echvi_3740	0.15	-1.2
4,453,397	-		Echvi_3740	0.15	-3.0
4,453,413	+		Echvi_3740	0.16	-0.0
4,453,508	-		Echvi_3740	0.19	-2.1
4,453,570	+		Echvi_3740	0.21	-1.4
4,453,616	+		Echvi_3740	0.22	-1.1
4,453,659	+		Echvi_3740	0.23	-1.8
4,453,660	-		Echvi_3740	0.23	-3.4
4,453,660	-		Echvi_3740	0.23	-4.1
4,453,705	+		Echvi_3740	0.25	+0.2
4,453,705	+		Echvi_3740	0.25	-1.1
4,453,706	-		Echvi_3740	0.25	-1.9
4,453,709	-		Echvi_3740	0.25	-3.2
4,453,728	-		Echvi_3740	0.26	+0.6
4,453,739	-		Echvi_3740	0.26	+0.7
4,453,781	-		Echvi_3740	0.27	-1.8
4,453,801	+		Echvi_3740	0.28	-2.1
4,453,802	-		Echvi_3740	0.28	-2.5
4,453,802	-		Echvi_3740	0.28	-0.0
4,453,802	-		Echvi_3740	0.28	-1.6
4,453,802	-		Echvi_3740	0.28	-1.8
4,453,816	+		Echvi_3740	0.28	-2.7
4,453,816	+		Echvi_3740	0.28	-0.6
4,453,816	+		Echvi_3740	0.28	-3.4
4,453,817	-		Echvi_3740	0.28	+0.2
4,453,817	-		Echvi_3740	0.28	-1.3
4,453,830	-		Echvi_3740	0.29	-1.8
4,453,830	-		Echvi_3740	0.29	-1.3
4,453,858	-		Echvi_3740	0.30	-2.6
4,453,913	+		Echvi_3740	0.31	-0.8
4,453,924	+		Echvi_3740	0.32	-3.0
4,453,935	+		Echvi_3740	0.32	-2.0
4,453,998	-		Echvi_3740	0.34	+1.1
4,454,031	-		Echvi_3740	0.35	-3.0
4,454,085	-		Echvi_3740	0.37	-0.4
4,454,195	+		Echvi_3740	0.40	+0.2
4,454,231	+		Echvi_3740	0.42	-1.3
4,454,316	-		Echvi_3740	0.44	-0.4
4,454,412	+		Echvi_3740	0.47	-1.8
4,454,425	+		Echvi_3740	0.48	-1.5
4,454,426	-		Echvi_3740	0.48	-0.3
4,454,426	-		Echvi_3740	0.48	-1.7
4,454,426	-		Echvi_3740	0.48	-1.0
4,454,429	+		Echvi_3740	0.48	-0.8
4,454,429	+		Echvi_3740	0.48	-1.2
4,454,429	+		Echvi_3740	0.48	-0.5
4,454,430	-		Echvi_3740	0.48	-3.1
4,454,573	+		Echvi_3740	0.52	-2.4
4,454,574	-		Echvi_3740	0.52	-2.3
4,454,591	+		Echvi_3740	0.53	+0.4
4,454,591	+		Echvi_3740	0.53	-1.1
4,454,592	-		Echvi_3740	0.53	-2.7
4,454,711	+		Echvi_3740	0.57	-2.8
4,454,775	+		Echvi_3740	0.59	-1.2
4,454,813	+		Echvi_3740	0.60	-1.2
4,454,813	+		Echvi_3740	0.60	-0.9
4,454,814	-		Echvi_3740	0.60	-1.5
4,454,814	-		Echvi_3740	0.60	-0.9
4,454,814	-		Echvi_3740	0.60	-2.0
4,454,815	+		Echvi_3740	0.60	-2.1
4,454,816	-		Echvi_3740	0.60	-1.8
4,454,816	-		Echvi_3740	0.60	+1.6
4,454,922	-		Echvi_3740	0.63	-1.4
4,454,931	-		Echvi_3740	0.64	-0.9
4,454,940	+		Echvi_3740	0.64	-1.0
4,454,940	+		Echvi_3740	0.64	-2.3
4,454,943	+		Echvi_3740	0.64	-1.6
4,454,943	+		Echvi_3740	0.64	-2.2
4,454,967	-		Echvi_3740	0.65	-2.8
4,455,007	-		Echvi_3740	0.66	-2.2
4,455,007	-		Echvi_3740	0.66	-1.4
4,455,007	-		Echvi_3740	0.66	-2.4
4,455,013	-		Echvi_3740	0.66	+1.6
4,455,045	-		Echvi_3740	0.67	-0.1
4,455,149	+		Echvi_3740	0.71	-0.8
4,455,150	-		Echvi_3740	0.71	+0.3
4,455,151	+		Echvi_3740	0.71	-1.1
4,455,151	+		Echvi_3740	0.71	-3.1
4,455,152	-		Echvi_3740	0.71	-3.3
4,455,179	+		Echvi_3740	0.72	-1.4
4,455,197	-		Echvi_3740	0.72	-0.0
4,455,197	-		Echvi_3740	0.72	-0.7
4,455,228	+		Echvi_3740	0.73	-1.8
4,455,228	+		Echvi_3740	0.73	-1.4
4,455,229	-		Echvi_3740	0.73	-0.6
4,455,308	+		Echvi_3740	0.76	-1.8
4,455,372	-		Echvi_3740	0.78	-0.8
4,455,372	-		Echvi_3740	0.78	-1.6
4,455,465	+		Echvi_3740	0.81	-1.3
4,455,482	+		Echvi_3740	0.81	-1.2
4,455,487	+		Echvi_3740	0.81	-2.9
4,455,488	-		Echvi_3740	0.81	+0.0
4,455,540	+		Echvi_3740	0.83	-1.1
4,455,541	-		Echvi_3740	0.83	-1.6
4,455,559	-		Echvi_3740	0.84	-2.0
4,455,574	-		Echvi_3740	0.84	-2.8
4,455,576	+		Echvi_3740	0.84	-1.7
4,455,633	-		Echvi_3740	0.86	-0.4
4,455,669	-		Echvi_3740	0.87	-1.7
4,455,708	+		Echvi_3740	0.88	-1.5
4,455,737	+		Echvi_3740	0.89	-0.6
4,455,738	-		Echvi_3740	0.89	-2.6
4,455,834	-				-1.4
4,455,834	-				-1.3
4,455,842	+				-1.8
4,455,844	+				+0.7
4,455,845	-				-1.0
4,455,845	-				-2.7
4,455,845	-				-1.8
4,455,927	-				-0.3
4,455,927	-				+0.1
4,455,928	+				+2.1
4,455,928	+				-2.1
4,455,940	-				-0.6
4,455,945	+				-2.2
4,455,945	+				-0.9
4,455,946	-				-0.9
4,455,946	-				-1.2
4,455,962	+				-2.3
4,456,134	-				-0.8
4,456,163	-				+0.6
4,456,192	+				-0.6
4,456,256	+		Echvi_3741	0.12	-1.2
4,456,256	+		Echvi_3741	0.12	-1.3
4,456,257	-		Echvi_3741	0.13	-1.5
4,456,257	-		Echvi_3741	0.13	-0.8
4,456,259	+		Echvi_3741	0.13	-0.9
4,456,259	+		Echvi_3741	0.13	-0.3
4,456,259	+		Echvi_3741	0.13	+0.1
4,456,260	-		Echvi_3741	0.13	-1.1
4,456,260	-		Echvi_3741	0.13	-2.4
4,456,260	-		Echvi_3741	0.13	-1.4
4,456,281	+		Echvi_3741	0.15	-1.3
4,456,282	-		Echvi_3741	0.15	-2.0
4,456,318	+		Echvi_3741	0.18	-3.5
4,456,325	+		Echvi_3741	0.19	-1.3
4,456,331	+		Echvi_3741	0.19	-2.4
4,456,332	-		Echvi_3741	0.19	-2.4
4,456,332	-		Echvi_3741	0.19	-3.8
4,456,346	-		Echvi_3741	0.21	-2.5
4,456,346	-		Echvi_3741	0.21	-0.2
4,456,370	+				-0.0
4,456,488	+		Echvi_3741	0.33	-1.8
4,456,488	+		Echvi_3741	0.33	-1.0
4,456,489	-		Echvi_3741	0.34	-0.9
4,456,489	-		Echvi_3741	0.34	+1.0
4,456,490	+				+1.6
4,456,490	+		Echvi_3741	0.34	-2.2
4,456,490	+		Echvi_3741	0.34	-0.4
4,456,517	-		Echvi_3741	0.36	-0.8
4,456,522	+		Echvi_3741	0.36	-3.2
4,456,522	+		Echvi_3741	0.36	-1.2
4,456,523	-		Echvi_3741	0.37	-1.6
4,456,532	+		Echvi_3741	0.37	-0.2
4,456,717	-		Echvi_3741	0.54	-2.6
4,456,722	+		Echvi_3741	0.55	-2.5
4,456,743	-		Echvi_3741	0.56	-1.4
4,456,743	-		Echvi_3741	0.56	-1.0
4,456,800	+		Echvi_3741	0.62	-1.3
4,456,869	-		Echvi_3741	0.68	-2.3
4,456,920	+		Echvi_3741	0.72	-2.2
4,456,954	-		Echvi_3741	0.76	-0.0
4,456,954	-		Echvi_3741	0.76	-0.2
4,457,005	+		Echvi_3741	0.80	-1.4
4,457,006	-		Echvi_3741	0.80	-0.2
4,457,009	-		Echvi_3741	0.80	-0.0
4,457,009	-		Echvi_3741	0.80	-0.0
4,457,009	-		Echvi_3741	0.80	-0.9
4,457,009	-		Echvi_3741	0.80	-3.1
4,457,009	-		Echvi_3741	0.80	-1.6
4,457,009	-		Echvi_3741	0.80	-1.0
4,457,009	-		Echvi_3741	0.80	-0.0
4,457,009	-		Echvi_3741	0.80	+0.3
4,457,010	+		Echvi_3741	0.81	-0.8
4,457,011	-		Echvi_3741	0.81	-3.2
4,457,046	-		Echvi_3741	0.84	-0.8