Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3221

Experiment: m.b. Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.001 mg/ml
3,821,403	-				-0.8
3,821,425	+				-0.5
3,821,455	+				+0.2
3,821,455	+				+0.9
3,821,455	+				-0.6
3,821,456	-				+1.0
3,821,488	+				+0.4
3,821,488	+				-0.2
3,821,634	+				-0.8
3,821,654	+				+1.2
3,821,671	-				+0.6
3,821,691	+				+0.2
3,821,698	+				-0.0
3,821,698	+				-0.1
3,821,743	-				-0.3
3,821,796	+				+0.1
3,821,880	-		Echvi_3220	0.13	-1.3
3,821,925	-		Echvi_3220	0.23	+0.7
3,821,937	+		Echvi_3220	0.25	+0.8
3,821,937	+		Echvi_3220	0.25	+0.0
3,821,938	-		Echvi_3220	0.26	-0.4
3,821,968	+		Echvi_3220	0.32	-0.5
3,821,969	-		Echvi_3220	0.32	-2.8
3,821,969	-		Echvi_3220	0.32	-0.8
3,821,972	+		Echvi_3220	0.33	+0.1
3,822,336	-				-0.2
3,822,340	+				-0.5
3,822,345	+				-0.7
3,822,345	+				-0.2
3,822,345	+				-1.5
3,822,634	+		Echvi_3221	0.62	-1.6
3,822,634	+		Echvi_3221	0.62	-1.2
3,822,634	+		Echvi_3221	0.62	-0.7
3,822,635	-		Echvi_3221	0.62	+1.0
3,822,635	-		Echvi_3221	0.62	-1.5
3,822,635	-		Echvi_3221	0.62	-1.5
3,822,635	-		Echvi_3221	0.62	-1.0
3,822,635	-		Echvi_3221	0.62	-0.1
3,822,666	-		Echvi_3221	0.70	+0.4
3,822,743	+				+1.0
3,822,743	+				+0.0
3,822,760	+				-0.2
3,822,760	+				+0.1
3,822,761	-				+1.5
3,822,762	+				+0.1
3,822,763	-				+0.7
3,822,764	+				-0.5
3,822,764	+				-0.3
3,822,765	-				-0.8
3,822,765	-				+0.5
3,822,765	-				-1.0
3,822,765	-				-0.7
3,822,765	-				+0.0
3,822,765	-				-0.4
3,822,765	-				-0.3
3,822,765	-				-0.1
3,822,765	-				-0.2
3,822,765	-				-0.5
3,822,765	-				-0.0
3,822,787	+				-0.8
3,822,793	-				-0.7
3,822,819	+				-1.4
3,822,819	+				-0.0
3,822,823	+				-0.1
3,822,823	+				+0.4
3,822,838	+				+0.6
3,822,874	+				+0.7
3,822,904	-				+0.0
3,822,958	+				-0.7
3,822,983	+				-1.0
3,822,992	+				-0.3
3,823,102	+				+0.8
3,823,102	+				+0.2
3,823,108	+				-0.8
3,823,108	+				-0.2
3,823,108	+				+0.5
3,823,108	+				-1.2
3,823,109	-		Echvi_3222	0.10	-3.8
3,823,109	-		Echvi_3222	0.10	+0.1
3,823,109	-		Echvi_3222	0.10	-0.5
3,823,126	+		Echvi_3222	0.16	+0.5
3,823,127	-		Echvi_3222	0.16	+0.4
3,823,143	+		Echvi_3222	0.22	+0.9
3,823,209	+		Echvi_3222	0.46	-1.6
3,823,209	+		Echvi_3222	0.46	-0.3
3,823,210	-		Echvi_3222	0.46	+1.1
3,823,224	+		Echvi_3222	0.51	-1.5
3,823,247	-		Echvi_3222	0.59	-0.8
3,823,247	-		Echvi_3222	0.59	+0.2
3,823,401	-				-0.5
3,823,401	-				+0.1
3,823,407	-				-0.7
3,823,465	+		Echvi_3223	0.17	+0.9
3,823,730	-		Echvi_3223	0.61	+0.3
3,823,732	-		Echvi_3223	0.62	-0.3