Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3101

Experiment: m.b. Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.001 mg/ml
3,703,735	+		Echvi_3100	0.23	+0.1
3,703,735	+		Echvi_3100	0.23	+1.2
3,703,736	-		Echvi_3100	0.23	-0.1
3,703,744	-		Echvi_3100	0.24	+1.2
3,703,870	+		Echvi_3100	0.35	-0.9
3,703,968	+		Echvi_3100	0.43	+1.0
3,703,969	-		Echvi_3100	0.43	-0.6
3,703,969	-		Echvi_3100	0.43	-2.0
3,704,033	+		Echvi_3100	0.49	+0.2
3,704,033	+		Echvi_3100	0.49	+2.0
3,704,103	+		Echvi_3100	0.55	-0.3
3,704,103	+		Echvi_3100	0.55	-1.5
3,704,104	-		Echvi_3100	0.55	+0.0
3,704,106	+		Echvi_3100	0.55	+0.1
3,704,106	+		Echvi_3100	0.55	-1.2
3,704,107	-		Echvi_3100	0.55	-0.0
3,704,282	+		Echvi_3100	0.71	+0.0
3,704,309	-		Echvi_3100	0.73	+0.2
3,704,327	+		Echvi_3100	0.74	-1.3
3,704,377	-		Echvi_3100	0.79	-0.7
3,704,437	+		Echvi_3100	0.84	-0.0
3,704,437	+		Echvi_3100	0.84	+0.9
3,704,438	-		Echvi_3100	0.84	+0.2
3,704,439	+		Echvi_3100	0.84	-0.4
3,704,439	+		Echvi_3100	0.84	+1.4
3,704,439	+		Echvi_3100	0.84	-0.3
3,704,488	-		Echvi_3100	0.89	+0.3
3,704,488	-		Echvi_3100	0.89	+2.3
3,704,515	+				+1.4
3,704,515	+				+0.4
3,704,515	+				+0.8
3,704,515	+				-1.3
3,704,516	-				-1.1
3,704,516	-				+1.3
3,704,516	-				+0.3
3,704,549	-				-0.6
3,704,575	-				-1.6
3,704,609	+				-1.4
3,704,846	-		Echvi_3101	0.17	+0.0
3,704,846	-		Echvi_3101	0.17	-0.8
3,704,846	-		Echvi_3101	0.17	-0.4
3,704,939	+		Echvi_3101	0.28	-0.4
3,704,940	-		Echvi_3101	0.28	-2.4
3,705,011	+		Echvi_3101	0.37	+0.1
3,705,012	-		Echvi_3101	0.37	-0.8
3,705,012	-		Echvi_3101	0.37	-2.8
3,705,110	+		Echvi_3101	0.49	-0.4
3,705,111	-		Echvi_3101	0.49	+1.6
3,705,111	-				+0.6
3,705,111	-		Echvi_3101	0.49	+0.3
3,705,111	-		Echvi_3101	0.49	-0.2
3,705,125	+		Echvi_3101	0.51	-0.2
3,705,320	-		Echvi_3101	0.75	+0.6
3,705,320	-		Echvi_3101	0.75	-0.0
3,705,320	-		Echvi_3101	0.75	-0.3
3,705,378	-		Echvi_3101	0.82	+0.6
3,705,378	-		Echvi_3101	0.82	-0.9
3,705,380	+		Echvi_3101	0.82	+1.6
3,705,381	-		Echvi_3101	0.82	-1.5
3,705,381	-		Echvi_3101	0.82	-0.3
3,705,381	-		Echvi_3101	0.82	-0.4
3,705,488	-				+1.0
3,705,491	+				+0.4
3,705,492	-				+1.1
3,705,492	-				-0.3
3,705,492	-				+0.7
3,705,557	-				-0.6
3,705,580	-				+0.6
3,705,642	-				-1.8
3,705,661	+				+0.1
3,705,743	-		Echvi_3102	0.14	-1.2
3,705,900	-		Echvi_3102	0.25	+0.1
3,705,906	+		Echvi_3102	0.25	-0.4
3,705,923	+		Echvi_3102	0.26	-0.4
3,705,923	+		Echvi_3102	0.26	+0.6
3,705,923	+		Echvi_3102	0.26	-0.3
3,706,084	+		Echvi_3102	0.38	-1.6
3,706,085	-		Echvi_3102	0.38	+0.6
3,706,092	+		Echvi_3102	0.38	+0.9
3,706,215	+		Echvi_3102	0.47	+0.2
3,706,218	+		Echvi_3102	0.47	+0.3
3,706,219	-		Echvi_3102	0.47	-1.8
3,706,325	-		Echvi_3102	0.55	-0.6
3,706,327	+		Echvi_3102	0.55	-0.1
3,706,362	+		Echvi_3102	0.57	-1.6
3,706,362	+		Echvi_3102	0.57	-1.3
3,706,363	-		Echvi_3102	0.57	+0.6
3,706,448	-		Echvi_3102	0.63	-0.1
3,706,499	+		Echvi_3102	0.67	-0.8