Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1153

Experiment: m.b. Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.001 mg/ml
1,320,310	+		Echvi_1152	0.53	-0.3
1,320,310	+		Echvi_1152	0.53	-0.5
1,320,324	+		Echvi_1152	0.54	+0.8
1,320,325	-		Echvi_1152	0.54	+0.1
1,320,475	+		Echvi_1152	0.66	+0.6
1,320,475	+		Echvi_1152	0.66	-0.5
1,320,556	+		Echvi_1152	0.72	-0.6
1,320,557	-		Echvi_1152	0.72	-0.1
1,320,557	-		Echvi_1152	0.72	-0.4
1,320,557	-		Echvi_1152	0.72	-1.8
1,320,557	-		Echvi_1152	0.72	-0.0
1,320,622	+		Echvi_1152	0.77	-1.1
1,320,623	-		Echvi_1152	0.77	-0.2
1,320,623	-		Echvi_1152	0.77	-1.5
1,320,667	+		Echvi_1152	0.81	+0.2
1,320,668	-		Echvi_1152	0.81	+0.2
1,320,668	-		Echvi_1152	0.81	+2.4
1,320,705	-		Echvi_1152	0.84	+0.8
1,320,736	+		Echvi_1152	0.86	-0.8
1,320,767	-		Echvi_1152	0.89	+0.5
1,320,767	-		Echvi_1152	0.89	-0.5
1,320,838	+				-1.0
1,320,838	+				-0.5
1,320,838	+				-2.3
1,320,849	-				-0.3
1,320,858	-				+0.3
1,320,858	-				+0.3
1,320,905	+				+0.5
1,320,905	+				-0.2
1,320,905	+				-1.0
1,320,922	-				-0.3
1,320,922	-				+0.5
1,320,923	+				-0.1
1,320,924	-				-2.1
1,320,924	-				+0.5
1,320,924	-				-1.0
1,320,924	-				+0.5
1,320,924	-				-0.3
1,321,006	-				+1.8
1,321,044	+				+0.5
1,321,047	+				-0.6
1,321,047	+				+0.8
1,321,047	+				+0.9
1,321,048	-				+1.8
1,321,101	+				+1.5
1,321,101	+				-1.5
1,321,102	-				-1.0
1,321,161	+		Echvi_1153	0.11	-0.4
1,321,161	+		Echvi_1153	0.11	-1.1
1,321,162	-		Echvi_1153	0.11	-0.7
1,321,179	-		Echvi_1153	0.13	+1.8
1,321,179	-		Echvi_1153	0.13	-0.5
1,321,238	-		Echvi_1153	0.17	-0.1
1,321,447	+		Echvi_1153	0.32	+0.4
1,321,447	+		Echvi_1153	0.32	+0.1
1,321,447	+		Echvi_1153	0.32	-0.3
1,321,448	-		Echvi_1153	0.32	+0.3
1,321,448	-		Echvi_1153	0.32	-0.1
1,321,582	+		Echvi_1153	0.41	+0.1
1,321,583	-		Echvi_1153	0.41	-0.9
1,321,632	-		Echvi_1153	0.45	+1.5
1,321,642	-		Echvi_1153	0.46	-0.2
1,321,711	-		Echvi_1153	0.51	-0.3
1,321,969	+		Echvi_1153	0.69	-1.3
1,322,023	+		Echvi_1153	0.73	+2.0
1,322,024	-		Echvi_1153	0.73	-0.3
1,322,025	+		Echvi_1153	0.73	-0.6
1,322,025	+		Echvi_1153	0.73	+0.8
1,322,026	-		Echvi_1153	0.73	-0.6
1,322,026	-		Echvi_1153	0.73	-3.1
1,322,026	-		Echvi_1153	0.73	-0.8
1,322,066	+		Echvi_1153	0.76	-0.5
1,322,066	+		Echvi_1153	0.76	+0.8
1,322,067	-		Echvi_1153	0.76	+0.1
1,322,067	-		Echvi_1153	0.76	-1.0
1,322,067	-		Echvi_1153	0.76	-0.1
1,322,076	+		Echvi_1153	0.77	-0.6
1,322,149	-		Echvi_1153	0.82	-0.3
1,322,152	-		Echvi_1153	0.82	-0.4
1,322,228	+		Echvi_1153	0.88	-0.7
1,322,250	-		Echvi_1153	0.89	-0.9
1,322,325	+				+0.3
1,322,325	+				-1.0
1,322,326	-				-0.1
1,322,405	+				-0.4
1,322,405	+				-1.1
1,322,405	+				-0.3
1,322,406	-				+0.1
1,322,406	-				+1.4
1,322,406	-				+1.0
1,322,406	-				+0.6
1,322,427	+				+0.0
1,322,427	+				-0.2
1,322,428	-				-0.1
1,322,428	-				+0.1
1,322,430	-				+0.4
1,322,457	-				-0.1
1,322,461	+				-0.1
1,322,461	+				+0.6
1,322,461	+				-1.1
1,322,461	+				+0.1
1,322,461	+				-0.4
1,322,462	-				-0.8
1,322,462	-				-1.3
1,322,520	+				-0.5
1,322,520	+				-0.2
1,322,526	+				-0.7
1,322,527	-				+0.3
1,322,527	-				+0.2
1,322,632	+		Echvi_1154	0.11	+0.2
1,322,638	+		Echvi_1154	0.12	+0.2
1,322,638	+		Echvi_1154	0.12	+0.9
1,322,638	+		Echvi_1154	0.12	-0.2
1,322,638	+		Echvi_1154	0.12	-2.4
1,322,639	-		Echvi_1154	0.12	-0.5
1,322,639	-		Echvi_1154	0.12	+0.6
1,322,639	-		Echvi_1154	0.12	-1.1
1,322,639	-		Echvi_1154	0.12	-1.0
1,322,639	-		Echvi_1154	0.12	-0.7
1,322,651	-		Echvi_1154	0.14	-0.7
1,322,774	+		Echvi_1154	0.32	-0.1
1,322,775	-		Echvi_1154	0.32	-0.0
1,322,817	+		Echvi_1154	0.38	-2.1
1,322,817	+		Echvi_1154	0.38	-2.2
1,322,832	+		Echvi_1154	0.40	+1.2
1,322,833	-		Echvi_1154	0.40	+0.7
1,322,881	-		Echvi_1154	0.47	-0.7
1,322,881	-		Echvi_1154	0.47	+0.1
1,322,957	-		Echvi_1154	0.58	-1.0
1,322,957	-		Echvi_1154	0.58	+1.1
1,322,957	-		Echvi_1154	0.58	+0.1
1,322,962	-		Echvi_1154	0.59	-0.8
1,322,962	-		Echvi_1154	0.59	+1.3
1,322,962	-		Echvi_1154	0.59	-1.1
1,322,988	+		Echvi_1154	0.63	+0.3
1,322,988	+		Echvi_1154	0.63	-0.7
1,322,989	-		Echvi_1154	0.63	-0.5
1,322,989	-		Echvi_1154	0.63	-0.1
1,323,044	-		Echvi_1154	0.71	-0.5
1,323,044	-		Echvi_1154	0.71	+0.2
1,323,073	+		Echvi_1154	0.75	+0.3
1,323,073	+		Echvi_1154	0.75	-1.6
1,323,073	+		Echvi_1154	0.75	-0.7
1,323,074	-		Echvi_1154	0.75	-0.9
1,323,074	-		Echvi_1154	0.75	-0.5
1,323,079	-		Echvi_1154	0.76	-0.7
1,323,079	-		Echvi_1154	0.76	+0.8
1,323,128	+		Echvi_1154	0.83	-0.8
1,323,128	+		Echvi_1154	0.83	-0.5
1,323,128	+		Echvi_1154	0.83	-0.8
1,323,172	+		Echvi_1154	0.90	+1.4
1,323,172	+		Echvi_1154	0.90	-0.4
1,323,174	+		Echvi_1154	0.90	-2.1
1,323,174	+				+1.8
1,323,175	-				+0.5
1,323,200	+				-1.9
1,323,200	+				-0.5
1,323,201	-				+0.4
1,323,228	-				-0.2
1,323,255	+				+1.8
1,323,274	+				+1.0
1,323,274	+				+0.3
1,323,274	+				+0.2
1,323,275	-				-0.5
1,323,275	-				+0.7
1,323,277	+				+0.4
1,323,277	+				-0.3
1,323,277	+				-0.4
1,323,277	+				+0.3
1,323,277	+				-0.8
1,323,278	-				+0.7
1,323,278	-				+0.3
1,323,278	-				-0.0
1,323,278	-				+0.5
1,323,278	-				+0.2
1,323,278	-				-0.2
1,323,285	+				+0.0
1,323,285	+				-1.1
1,323,285	+				-0.2
1,323,296	+		Echvi_1155	0.13	+0.5
1,323,296	+		Echvi_1155	0.13	+0.3
1,323,321	+		Echvi_1155	0.33	-1.0
1,323,351	+		Echvi_1155	0.56	+0.9
1,323,351	+		Echvi_1155	0.56	+0.0
1,323,352	-		Echvi_1155	0.57	+0.6
1,323,352	-		Echvi_1155	0.57	-0.3
1,323,352	-		Echvi_1155	0.57	-0.4