Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1034

Experiment: m.b. Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.001 mg/ml
1,197,024	+				+0.6
1,197,056	+				-0.3
1,197,066	+				-0.5
1,197,066	+				+2.4
1,197,067	-				+0.3
1,197,160	+				+0.4
1,197,160	+				+0.1
1,197,161	-				+0.8
1,197,178	+				+1.3
1,197,178	+				+0.1
1,197,179	-				+1.2
1,197,213	+				-1.3
1,197,213	+				+0.9
1,197,264	-				-0.4
1,197,264	-				+1.3
1,197,264	-				+0.8
1,197,264	-				-0.1
1,197,269	-				-2.7
1,197,289	+				-0.2
1,197,298	-				-0.4
1,197,298	-				-0.3
1,197,356	+				-0.8
1,197,357	-				+0.1
1,197,363	-				-0.5
1,197,363	-				-0.4
1,197,391	+				-0.9
1,197,495	+		Echvi_1033	0.32	-0.4
1,197,495	+		Echvi_1033	0.32	-0.3
1,197,496	-		Echvi_1033	0.33	+0.9
1,197,541	-		Echvi_1033	0.47	-0.1
1,197,654	-		Echvi_1033	0.82	-2.9
1,197,711	-				-0.5
1,197,711	-				-0.7
1,197,750	-				+2.4
1,197,780	-				+1.3
1,197,808	-				-0.2
1,197,813	+				-0.3
1,197,847	+				-2.1
1,197,847	+				+1.5
1,197,864	+				-1.0
1,197,884	+				-0.8
1,197,884	+				-0.1
1,197,884	+				+1.0
1,197,885	-				-0.1
1,197,944	-				-0.1
1,197,944	-				-0.2
1,197,995	-		Echvi_1034	0.15	-0.4
1,198,002	+		Echvi_1034	0.21	-0.6
1,198,020	-		Echvi_1034	0.36	-0.1
1,198,024	+		Echvi_1034	0.39	+0.5
1,198,024	+		Echvi_1034	0.39	+0.9
1,198,033	+		Echvi_1034	0.47	+1.0
1,198,033	+		Echvi_1034	0.47	-0.2
1,198,033	+		Echvi_1034	0.47	+2.1
1,198,033	+		Echvi_1034	0.47	+1.3
1,198,034	-		Echvi_1034	0.47	-0.2
1,198,058	-		Echvi_1034	0.68	+2.4
1,198,088	+				-0.5
1,198,089	-				-0.6
1,198,089	-				+1.0
1,198,089	-				+0.3
1,198,113	+				+0.4
1,198,124	+				+0.5
1,198,145	+				+0.4
1,198,162	+				-0.2
1,198,180	+				+0.3
1,198,180	+				-2.2
1,198,180	+				+0.0
1,198,180	+				-0.7
1,198,181	-				+1.2
1,198,181	-				+0.4
1,198,213	+		Echvi_1035	0.12	-1.2
1,198,213	+		Echvi_1035	0.12	+2.1
1,198,214	-		Echvi_1035	0.12	-0.6
1,198,255	+		Echvi_1035	0.18	-0.6
1,198,256	-		Echvi_1035	0.18	+0.4
1,198,259	+		Echvi_1035	0.18	-1.7
1,198,260	-		Echvi_1035	0.18	-2.1
1,198,260	-		Echvi_1035	0.18	+0.1
1,198,267	+		Echvi_1035	0.19	+0.0
1,198,268	-		Echvi_1035	0.19	+0.5
1,198,268	-		Echvi_1035	0.19	-0.2
1,198,272	+		Echvi_1035	0.20	+0.0
1,198,272	+		Echvi_1035	0.20	+0.3
1,198,272	+		Echvi_1035	0.20	+0.7
1,198,273	-		Echvi_1035	0.20	-0.9
1,198,278	-		Echvi_1035	0.20	+0.1
1,198,306	+		Echvi_1035	0.24	-2.1
1,198,356	+		Echvi_1035	0.30	-1.9
1,198,356	+		Echvi_1035	0.30	+1.8
1,198,357	-		Echvi_1035	0.30	+0.4
1,198,369	+		Echvi_1035	0.31	-1.6
1,198,370	-		Echvi_1035	0.32	+0.9
1,198,436	+		Echvi_1035	0.40	-0.3
1,198,437	-		Echvi_1035	0.40	-1.4
1,198,459	+		Echvi_1035	0.43	-0.4
1,198,459	+		Echvi_1035	0.43	-0.5
1,198,459	+		Echvi_1035	0.43	+0.4
1,198,460	-		Echvi_1035	0.43	+0.3
1,198,460	-		Echvi_1035	0.43	-0.7
1,198,463	+		Echvi_1035	0.43	+0.1
1,198,463	+		Echvi_1035	0.43	-1.1
1,198,463	+		Echvi_1035	0.43	-0.9
1,198,464	-		Echvi_1035	0.43	-0.3
1,198,528	+		Echvi_1035	0.51	+0.3
1,198,529	-		Echvi_1035	0.51	-0.7
1,198,558	+		Echvi_1035	0.55	+0.3
1,198,558	+		Echvi_1035	0.55	-0.1
1,198,611	+		Echvi_1035	0.61	+1.1
1,198,612	-		Echvi_1035	0.61	-0.3
1,198,612	-		Echvi_1035	0.61	-0.3
1,198,638	-		Echvi_1035	0.64	-0.9
1,198,638	-		Echvi_1035	0.64	-0.7
1,198,699	-		Echvi_1035	0.72	-0.4
1,198,738	+		Echvi_1035	0.77	-0.3
1,198,738	+		Echvi_1035	0.77	-1.0
1,198,738	+		Echvi_1035	0.77	+0.4
1,198,771	-		Echvi_1035	0.81	+1.2
1,198,772	+		Echvi_1035	0.81	+0.1
1,198,773	-		Echvi_1035	0.81	-0.2
1,198,773	-		Echvi_1035	0.81	+0.5
1,198,864	+				-0.1
1,198,911	+				-0.2
1,198,911	+				+0.3
1,198,911	+				+0.8
1,198,911	+				+0.0
1,198,913	+				-0.5
1,198,913	+				-0.5
1,198,914	-				-0.4
1,199,009	+		Echvi_1036	0.20	+0.1
1,199,010	-		Echvi_1036	0.20	-0.3
1,199,010	-		Echvi_1036	0.20	-0.0
1,199,010	-		Echvi_1036	0.20	+0.2
1,199,011	+		Echvi_1036	0.21	+0.1
1,199,011	+		Echvi_1036	0.21	+2.2
1,199,011	+		Echvi_1036	0.21	-0.8
1,199,053	+		Echvi_1036	0.30	+0.2
1,199,053	+		Echvi_1036	0.30	-0.6
1,199,054	-		Echvi_1036	0.30	+1.1
1,199,058	+		Echvi_1036	0.31	-0.7
1,199,059	-		Echvi_1036	0.32	+1.1
1,199,059	-		Echvi_1036	0.32	+0.7
1,199,061	-		Echvi_1036	0.32	-0.5
1,199,061	-		Echvi_1036	0.32	-0.8
1,199,061	-		Echvi_1036	0.32	+0.1
1,199,069	+		Echvi_1036	0.34	+1.9
1,199,069	+		Echvi_1036	0.34	+0.1
1,199,069	+		Echvi_1036	0.34	+0.0
1,199,070	-		Echvi_1036	0.34	-1.1
1,199,070	-		Echvi_1036	0.34	-1.6
1,199,070	-		Echvi_1036	0.34	-0.9