Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0017

Experiment: m.b. Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.001 mg/ml
15,432	+				+0.5
15,437	-				+1.1
15,500	+				+0.3
15,503	-				-0.1
15,531	+				+1.3
15,531	+				+0.2
15,532	-				-0.9
15,532	-				-0.1
15,532	-				-0.1
15,621	+		Echvi_0016	0.14	+0.0
15,692	+		Echvi_0016	0.25	-0.3
15,693	-		Echvi_0016	0.26	-0.2
15,694	+		Echvi_0016	0.26	-2.0
15,695	-		Echvi_0016	0.26	+0.6
15,695	-		Echvi_0016	0.26	-0.3
15,695	-		Echvi_0016	0.26	+1.3
15,695	-		Echvi_0016	0.26	-0.2
15,739	-		Echvi_0016	0.33	-0.7
15,739	-		Echvi_0016	0.33	-0.1
15,739	-		Echvi_0016	0.33	-0.4
15,739	-		Echvi_0016	0.33	-1.2
15,744	+		Echvi_0016	0.34	+1.2
15,820	+		Echvi_0016	0.46	+1.3
15,820	+		Echvi_0016	0.46	+0.0
15,820	+		Echvi_0016	0.46	+0.6
15,841	+		Echvi_0016	0.50	-0.3
15,842	-		Echvi_0016	0.50	-0.2
15,978	-		Echvi_0016	0.72	-0.2
15,978	-		Echvi_0016	0.72	-0.5
16,016	+		Echvi_0016	0.79	+2.0
16,056	+		Echvi_0016	0.85	+2.0
16,083	-		Echvi_0016	0.90	-3.0
16,114	+				-1.9
16,171	-				-0.5
16,221	-				+0.8
16,265	-				+0.7
16,265	-				+2.7
16,268	+				+0.4
16,283	-				+0.5
16,283	-				+0.7
16,283	-				+0.5
16,373	+		Echvi_0017	0.15	-1.3
16,373	+		Echvi_0017	0.15	+0.2
16,380	-		Echvi_0017	0.16	-0.5
16,389	-		Echvi_0017	0.17	-0.2
16,389	-		Echvi_0017	0.17	-0.4
16,483	+		Echvi_0017	0.29	+0.1
16,488	-		Echvi_0017	0.30	+1.0
16,518	+		Echvi_0017	0.34	-1.0
16,518	+		Echvi_0017	0.34	+0.1
16,518	+		Echvi_0017	0.34	+0.7
16,519	-		Echvi_0017	0.34	+0.2
16,519	-		Echvi_0017	0.34	+0.4
16,519	-		Echvi_0017	0.34	+0.6
16,620	-		Echvi_0017	0.47	-0.1
16,672	-		Echvi_0017	0.54	-0.7
16,743	+		Echvi_0017	0.63	+0.9
16,744	-		Echvi_0017	0.63	+1.0
16,745	+		Echvi_0017	0.63	+0.9
16,745	+		Echvi_0017	0.63	+1.7
16,746	-		Echvi_0017	0.63	-1.1
16,746	-		Echvi_0017	0.63	+0.1
16,750	+		Echvi_0017	0.64	+0.3
16,751	-		Echvi_0017	0.64	+0.9
16,751	-		Echvi_0017	0.64	-2.2
16,751	-		Echvi_0017	0.64	+1.5
16,756	+		Echvi_0017	0.65	+0.1
16,777	+		Echvi_0017	0.67	-0.2
16,778	-		Echvi_0017	0.67	+0.3
16,778	-		Echvi_0017	0.67	+0.3
16,783	+		Echvi_0017	0.68	+0.7
16,783	+		Echvi_0017	0.68	+1.0
16,803	-		Echvi_0017	0.71	-0.2
16,849	-		Echvi_0017	0.77	+0.9
16,860	+		Echvi_0017	0.78	+0.2
16,860	+		Echvi_0017	0.78	-0.3
16,884	-		Echvi_0017	0.81	+1.4
16,908	+		Echvi_0017	0.84	+0.4
16,908	+		Echvi_0017	0.84	-0.9
16,909	-		Echvi_0017	0.85	+0.1
16,909	-		Echvi_0017	0.85	+0.1
16,909	-		Echvi_0017	0.85	+0.3
16,910	+		Echvi_0017	0.85	+0.9
16,910	+		Echvi_0017	0.85	+4.1
16,910	+		Echvi_0017	0.85	+0.3
16,911	-		Echvi_0017	0.85	-0.3
16,911	-		Echvi_0017	0.85	-0.8
17,111	-		Echvi_0018	0.11	+0.2
17,111	-		Echvi_0018	0.11	-0.1
17,111	-		Echvi_0018	0.11	+0.9
17,168	-		Echvi_0018	0.19	+0.7
17,208	+		Echvi_0018	0.25	-2.0
17,252	+		Echvi_0018	0.32	-0.5
17,253	-		Echvi_0018	0.32	+0.8
17,301	+		Echvi_0018	0.39	-0.7
17,302	-		Echvi_0018	0.39	+0.5
17,310	+		Echvi_0018	0.40	-1.3
17,311	-		Echvi_0018	0.40	-0.3
17,311	-		Echvi_0018	0.40	+1.7
17,321	-		Echvi_0018	0.42	-0.7
17,321	-		Echvi_0018	0.42	-0.4
17,437	+		Echvi_0018	0.59	+0.3
17,483	+		Echvi_0018	0.66	-1.4
17,647	-				+1.1
17,653	+				+0.5
17,708	+				+0.0
17,709	-				+1.3
17,709	-				+1.2
17,866	-		Echvi_0019	0.14	-0.7
17,887	+		Echvi_0019	0.17	-0.7
17,891	+		Echvi_0019	0.17	+0.1
17,891	+		Echvi_0019	0.17	+0.4
17,913	+		Echvi_0019	0.21	+0.7
17,913	+		Echvi_0019	0.21	+0.4
17,914	-		Echvi_0019	0.21	+0.1
17,915	+		Echvi_0019	0.21	-0.1
17,916	-		Echvi_0019	0.21	-0.0
17,949	+		Echvi_0019	0.26	+0.3
17,950	-		Echvi_0019	0.26	-0.0
17,955	+		Echvi_0019	0.27	-0.3
17,956	-		Echvi_0019	0.27	-0.9