Strain Fitness in Escherichia coli BW25113 around b2491
Experiment: Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 10 vol% |
---|---|---|---|---|---|
remove | |||||
2,609,013 | + | hyfI | b2489 | 0.38 | +0.2 |
2,609,013 | + | hyfI | b2489 | 0.38 | -0.0 |
2,609,095 | - | hyfI | b2489 | 0.48 | +1.9 |
2,609,097 | + | hyfI | b2489 | 0.49 | +0.3 |
2,609,290 | - | hyfI | b2489 | 0.74 | +0.2 |
2,609,329 | + | hyfI | b2489 | 0.79 | -0.4 |
2,609,329 | + | hyfI | b2489 | 0.79 | -0.4 |
2,609,393 | - | hyfI | b2489 | 0.88 | +0.3 |
2,609,393 | - | hyfI | b2489 | 0.88 | +0.2 |
2,609,480 | + | +0.2 | |||
2,609,482 | + | +0.9 | |||
2,609,490 | - | -0.0 | |||
2,609,490 | - | +0.4 | |||
2,609,576 | - | b2490 | b2490 | 0.23 | +0.8 |
2,609,576 | - | b2490 | b2490 | 0.23 | -1.0 |
2,609,595 | - | b2490 | b2490 | 0.28 | -0.3 |
2,609,671 | - | b2490 | b2490 | 0.46 | +0.5 |
2,610,075 | - | +1.1 | |||
2,610,080 | - | -0.0 | |||
2,610,149 | - | hyfR | b2491 | 0.11 | +0.2 |
2,610,261 | + | hyfR | b2491 | 0.17 | -0.8 |
2,610,284 | - | hyfR | b2491 | 0.18 | -0.8 |
2,610,286 | - | hyfR | b2491 | 0.18 | +1.0 |
2,610,406 | + | hyfR | b2491 | 0.24 | +0.5 |
2,610,411 | + | hyfR | b2491 | 0.24 | -0.2 |
2,610,555 | + | hyfR | b2491 | 0.31 | -0.8 |
2,610,555 | + | hyfR | b2491 | 0.31 | +0.0 |
2,610,733 | - | hyfR | b2491 | 0.40 | -1.0 |
2,610,768 | - | hyfR | b2491 | 0.42 | +1.5 |
2,610,768 | - | hyfR | b2491 | 0.42 | -0.2 |
2,610,852 | - | hyfR | b2491 | 0.46 | +0.2 |
2,610,852 | - | hyfR | b2491 | 0.46 | +0.5 |
2,611,065 | + | hyfR | b2491 | 0.57 | +1.5 |
2,611,090 | + | hyfR | b2491 | 0.58 | +0.8 |
2,611,139 | - | hyfR | b2491 | 0.60 | -1.3 |
2,611,139 | - | hyfR | b2491 | 0.60 | -0.4 |
2,611,289 | + | hyfR | b2491 | 0.68 | +0.5 |
2,611,392 | - | hyfR | b2491 | 0.73 | -1.4 |
2,611,599 | - | hyfR | b2491 | 0.83 | +0.5 |
2,611,599 | - | hyfR | b2491 | 0.83 | +0.6 |
2,611,829 | - | -0.4 | |||
2,611,950 | + | -0.4 | |||
2,612,067 | - | focB | b2492 | 0.13 | +0.5 |
2,612,067 | - | focB | b2492 | 0.13 | -0.7 |
2,612,133 | - | focB | b2492 | 0.21 | -0.1 |
2,612,145 | + | focB | b2492 | 0.22 | +0.6 |
2,612,214 | + | focB | b2492 | 0.30 | -0.5 |
2,612,214 | + | focB | b2492 | 0.30 | +1.5 |
2,612,217 | - | focB | b2492 | 0.31 | +0.8 |
2,612,217 | - | focB | b2492 | 0.31 | +2.4 |
2,612,397 | + | focB | b2492 | 0.52 | +1.6 |
2,612,425 | + | focB | b2492 | 0.55 | +0.4 |
2,612,497 | - | focB | b2492 | 0.64 | -0.2 |
2,612,579 | + | focB | b2492 | 0.73 | -0.0 |
2,612,579 | + | focB | b2492 | 0.73 | +0.1 |
2,612,589 | - | focB | b2492 | 0.75 | +0.1 |
2,612,690 | - | focB | b2492 | 0.86 | +0.6 |
2,612,690 | - | focB | b2492 | 0.86 | +0.8 |
2,612,720 | - | +0.8 | |||
2,612,720 | - | +1.4 | |||
2,612,749 | + | +0.2 | |||
2,612,749 | + | +0.2 | |||
2,612,764 | + | -0.5 | |||
2,612,764 | + | +1.4 | |||
2,612,845 | - | -2.0 | |||
2,612,845 | - | -0.1 | |||
2,612,875 | - | -0.4 | |||
2,612,875 | - | -1.4 |
Or see this region's nucleotide sequence