Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4913 and PfGW456L13_4914 are separated by 33 nucleotides PfGW456L13_4914 and PfGW456L13_4915 are separated by 27 nucleotides PfGW456L13_4915 and PfGW456L13_4916 are separated by 30 nucleotides
PfGW456L13_4913 - DipZ protein, at 5,490,042 to 5,491,817
_4913
PfGW456L13_4914 - Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12), at 5,491,851 to 5,492,369
_4914
PfGW456L13_4915 - hypothetical protein, at 5,492,397 to 5,492,636
_4915
PfGW456L13_4916 - Phosphate regulon transcriptional regulatory protein PhoB (SphR), at 5,492,667 to 5,493,386
_4916
Position (kb) 5491
5492
5493 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 5490.862 kb on + strand, within PfGW456L13_4913 at 5490.863 kb on - strand, within PfGW456L13_4913 at 5490.895 kb on + strand, within PfGW456L13_4913 at 5490.895 kb on + strand, within PfGW456L13_4913 at 5490.895 kb on + strand, within PfGW456L13_4913 at 5490.896 kb on - strand, within PfGW456L13_4913 at 5490.896 kb on - strand, within PfGW456L13_4913 at 5490.896 kb on - strand, within PfGW456L13_4913 at 5490.896 kb on - strand, within PfGW456L13_4913 at 5491.358 kb on + strand, within PfGW456L13_4913 at 5491.358 kb on + strand, within PfGW456L13_4913 at 5491.795 kb on + strand at 5491.796 kb on - strand at 5491.825 kb on - strand at 5492.152 kb on + strand, within PfGW456L13_4914 at 5492.152 kb on + strand, within PfGW456L13_4914 at 5492.153 kb on - strand, within PfGW456L13_4914 at 5492.153 kb on - strand, within PfGW456L13_4914 at 5492.153 kb on - strand, within PfGW456L13_4914 at 5492.343 kb on + strand at 5492.365 kb on + strand at 5492.365 kb on + strand at 5492.365 kb on + strand at 5492.365 kb on + strand at 5492.365 kb on + strand at 5492.365 kb on + strand at 5492.365 kb on + strand at 5492.366 kb on - strand at 5492.366 kb on - strand at 5492.366 kb on - strand at 5492.366 kb on - strand at 5492.366 kb on - strand at 5492.400 kb on + strand at 5492.400 kb on + strand at 5492.400 kb on + strand at 5492.401 kb on - strand at 5492.401 kb on - strand at 5492.401 kb on - strand at 5492.401 kb on - strand at 5492.413 kb on - strand at 5492.413 kb on - strand at 5492.413 kb on - strand at 5492.449 kb on - strand, within PfGW456L13_4915 at 5492.463 kb on - strand, within PfGW456L13_4915 at 5492.494 kb on + strand, within PfGW456L13_4915 at 5492.494 kb on + strand, within PfGW456L13_4915 at 5492.495 kb on - strand, within PfGW456L13_4915 at 5492.495 kb on - strand, within PfGW456L13_4915 at 5492.495 kb on - strand, within PfGW456L13_4915 at 5492.495 kb on - strand, within PfGW456L13_4915 at 5492.495 kb on - strand, within PfGW456L13_4915 at 5492.495 kb on - strand, within PfGW456L13_4915 at 5492.495 kb on - strand, within PfGW456L13_4915 at 5492.666 kb on + strand at 5492.667 kb on - strand at 5492.667 kb on - strand at 5492.706 kb on - strand at 5492.706 kb on - strand at 5492.711 kb on + strand at 5492.712 kb on - strand at 5492.970 kb on + strand, within PfGW456L13_4916 at 5492.970 kb on + strand, within PfGW456L13_4916 at 5492.971 kb on - strand, within PfGW456L13_4916 at 5492.971 kb on - strand, within PfGW456L13_4916 at 5493.171 kb on + strand, within PfGW456L13_4916 at 5493.171 kb on + strand, within PfGW456L13_4916 at 5493.172 kb on - strand, within PfGW456L13_4916 at 5493.172 kb on - strand, within PfGW456L13_4916 at 5493.172 kb on - strand, within PfGW456L13_4916
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 5,490,862 + PfGW456L13_4913 0.46 -2.9 5,490,863 - PfGW456L13_4913 0.46 +0.3 5,490,895 + PfGW456L13_4913 0.48 +1.5 5,490,895 + PfGW456L13_4913 0.48 -0.7 5,490,895 + PfGW456L13_4913 0.48 -0.3 5,490,896 - PfGW456L13_4913 0.48 -0.9 5,490,896 - PfGW456L13_4913 0.48 -0.4 5,490,896 - PfGW456L13_4913 0.48 +1.6 5,490,896 - PfGW456L13_4913 0.48 -0.7 5,491,358 + PfGW456L13_4913 0.74 -1.5 5,491,358 + PfGW456L13_4913 0.74 -1.9 5,491,795 + -3.5 5,491,796 - -0.0 5,491,825 - +0.8 5,492,152 + PfGW456L13_4914 0.58 +0.1 5,492,152 + PfGW456L13_4914 0.58 -0.1 5,492,153 - PfGW456L13_4914 0.58 +0.0 5,492,153 - PfGW456L13_4914 0.58 +0.9 5,492,153 - PfGW456L13_4914 0.58 +1.2 5,492,343 + -4.1 5,492,365 + -1.6 5,492,365 + +0.3 5,492,365 + -3.8 5,492,365 + -0.2 5,492,365 + -0.3 5,492,365 + +0.1 5,492,365 + -2.6 5,492,366 - +1.1 5,492,366 - +0.0 5,492,366 - -2.3 5,492,366 - +0.2 5,492,366 - -0.4 5,492,400 + +0.6 5,492,400 + -3.0 5,492,400 + -1.3 5,492,401 - -4.2 5,492,401 - -5.0 5,492,401 - -0.0 5,492,401 - -2.0 5,492,413 - -1.1 5,492,413 - +0.3 5,492,413 - +0.7 5,492,449 - PfGW456L13_4915 0.22 +0.6 5,492,463 - PfGW456L13_4915 0.28 -0.8 5,492,494 + PfGW456L13_4915 0.40 -0.6 5,492,494 + PfGW456L13_4915 0.40 -1.3 5,492,495 - PfGW456L13_4915 0.41 -1.4 5,492,495 - PfGW456L13_4915 0.41 -1.8 5,492,495 - PfGW456L13_4915 0.41 -2.1 5,492,495 - PfGW456L13_4915 0.41 +0.4 5,492,495 - PfGW456L13_4915 0.41 +0.2 5,492,495 - PfGW456L13_4915 0.41 +0.6 5,492,495 - PfGW456L13_4915 0.41 +0.7 5,492,666 + +0.2 5,492,667 - -0.8 5,492,667 - -1.4 5,492,706 - +1.3 5,492,706 - -0.6 5,492,711 + -2.0 5,492,712 - -1.3 5,492,970 + PfGW456L13_4916 0.42 +1.8 5,492,970 + PfGW456L13_4916 0.42 +0.6 5,492,971 - PfGW456L13_4916 0.42 +1.1 5,492,971 - PfGW456L13_4916 0.42 +1.2 5,493,171 + PfGW456L13_4916 0.70 -2.0 5,493,171 + PfGW456L13_4916 0.70 +0.0 5,493,172 - PfGW456L13_4916 0.70 -0.8 5,493,172 - PfGW456L13_4916 0.70 -0.0 5,493,172 - PfGW456L13_4916 0.70 +0.1
Or see this region's nucleotide sequence