Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4297 and PfGW456L13_4298 are separated by 162 nucleotides PfGW456L13_4298 and PfGW456L13_4299 overlap by 11 nucleotides
PfGW456L13_4297 - 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), at 4,813,857 to 4,814,750
_4297
PfGW456L13_4298 - D-glycerate 2-kinase (EC 2.7.1.-), at 4,814,913 to 4,816,193
_4298
PfGW456L13_4299 - Pyruvate kinase (EC 2.7.1.40), at 4,816,183 to 4,817,598
_4299
Position (kb)
4814
4815
4816
4817 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4814.077 kb on + strand, within PfGW456L13_4297 at 4814.077 kb on + strand, within PfGW456L13_4297 at 4814.077 kb on + strand, within PfGW456L13_4297 at 4814.077 kb on + strand, within PfGW456L13_4297 at 4814.077 kb on + strand, within PfGW456L13_4297 at 4814.078 kb on - strand, within PfGW456L13_4297 at 4814.078 kb on - strand, within PfGW456L13_4297 at 4814.078 kb on - strand, within PfGW456L13_4297 at 4814.078 kb on - strand, within PfGW456L13_4297 at 4814.078 kb on - strand, within PfGW456L13_4297 at 4814.078 kb on - strand, within PfGW456L13_4297 at 4814.078 kb on - strand, within PfGW456L13_4297 at 4814.078 kb on - strand, within PfGW456L13_4297 at 4814.078 kb on - strand, within PfGW456L13_4297 at 4814.202 kb on + strand, within PfGW456L13_4297 at 4814.203 kb on - strand, within PfGW456L13_4297 at 4814.748 kb on + strand at 4814.748 kb on + strand at 4814.749 kb on - strand at 4814.749 kb on - strand at 4814.749 kb on - strand at 4814.812 kb on + strand at 4814.813 kb on - strand at 4814.889 kb on + strand at 4814.889 kb on + strand at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.453 kb on + strand, within PfGW456L13_4298 at 4815.453 kb on + strand, within PfGW456L13_4298 at 4815.453 kb on + strand, within PfGW456L13_4298 at 4815.453 kb on + strand, within PfGW456L13_4298 at 4815.454 kb on - strand, within PfGW456L13_4298 at 4815.454 kb on - strand, within PfGW456L13_4298 at 4815.454 kb on - strand, within PfGW456L13_4298 at 4815.454 kb on - strand, within PfGW456L13_4298 at 4815.454 kb on - strand, within PfGW456L13_4298 at 4815.454 kb on - strand, within PfGW456L13_4298 at 4815.507 kb on - strand, within PfGW456L13_4298 at 4815.551 kb on - strand, within PfGW456L13_4298 at 4815.948 kb on + strand, within PfGW456L13_4298 at 4815.949 kb on - strand, within PfGW456L13_4298 at 4815.949 kb on - strand, within PfGW456L13_4298 at 4816.023 kb on + strand, within PfGW456L13_4298 at 4816.024 kb on - strand, within PfGW456L13_4298 at 4816.114 kb on + strand at 4816.115 kb on - strand at 4816.178 kb on + strand at 4816.179 kb on - strand at 4816.194 kb on + strand at 4816.598 kb on - strand, within PfGW456L13_4299 at 4816.598 kb on - strand, within PfGW456L13_4299 at 4816.664 kb on + strand, within PfGW456L13_4299 at 4816.664 kb on + strand, within PfGW456L13_4299 at 4817.132 kb on - strand, within PfGW456L13_4299
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 4,814,077 + PfGW456L13_4297 0.25 -1.2 4,814,077 + PfGW456L13_4297 0.25 -1.2 4,814,077 + PfGW456L13_4297 0.25 -0.1 4,814,077 + PfGW456L13_4297 0.25 -0.4 4,814,077 + PfGW456L13_4297 0.25 +0.6 4,814,078 - PfGW456L13_4297 0.25 +0.5 4,814,078 - PfGW456L13_4297 0.25 -0.0 4,814,078 - PfGW456L13_4297 0.25 +1.0 4,814,078 - PfGW456L13_4297 0.25 +0.3 4,814,078 - PfGW456L13_4297 0.25 -0.4 4,814,078 - PfGW456L13_4297 0.25 +0.6 4,814,078 - PfGW456L13_4297 0.25 +0.2 4,814,078 - PfGW456L13_4297 0.25 -0.5 4,814,078 - PfGW456L13_4297 0.25 -3.5 4,814,202 + PfGW456L13_4297 0.39 +0.2 4,814,203 - PfGW456L13_4297 0.39 +0.2 4,814,748 + +1.6 4,814,748 + -3.7 4,814,749 - -0.4 4,814,749 - +1.5 4,814,749 - -1.3 4,814,812 + +0.3 4,814,813 - +0.8 4,814,889 + -0.5 4,814,889 + +0.1 4,815,449 + PfGW456L13_4298 0.42 +1.0 4,815,449 + PfGW456L13_4298 0.42 +1.5 4,815,449 + PfGW456L13_4298 0.42 +0.6 4,815,449 + PfGW456L13_4298 0.42 -0.6 4,815,449 + PfGW456L13_4298 0.42 -1.9 4,815,449 + PfGW456L13_4298 0.42 +0.4 4,815,449 + PfGW456L13_4298 0.42 +0.5 4,815,449 + PfGW456L13_4298 0.42 +1.1 4,815,450 - PfGW456L13_4298 0.42 +1.0 4,815,450 - PfGW456L13_4298 0.42 -1.0 4,815,450 - PfGW456L13_4298 0.42 -0.2 4,815,450 - PfGW456L13_4298 0.42 -0.1 4,815,450 - PfGW456L13_4298 0.42 -0.1 4,815,450 - PfGW456L13_4298 0.42 +0.4 4,815,450 - PfGW456L13_4298 0.42 -0.8 4,815,450 - PfGW456L13_4298 0.42 -0.6 4,815,450 - PfGW456L13_4298 0.42 -1.3 4,815,450 - PfGW456L13_4298 0.42 -1.9 4,815,450 - PfGW456L13_4298 0.42 -1.3 4,815,450 - PfGW456L13_4298 0.42 -0.3 4,815,450 - PfGW456L13_4298 0.42 +0.3 4,815,450 - PfGW456L13_4298 0.42 -1.4 4,815,453 + PfGW456L13_4298 0.42 -1.8 4,815,453 + PfGW456L13_4298 0.42 -1.3 4,815,453 + PfGW456L13_4298 0.42 -0.3 4,815,453 + PfGW456L13_4298 0.42 -1.5 4,815,454 - PfGW456L13_4298 0.42 -0.6 4,815,454 - PfGW456L13_4298 0.42 -0.3 4,815,454 - PfGW456L13_4298 0.42 +0.5 4,815,454 - PfGW456L13_4298 0.42 -0.6 4,815,454 - PfGW456L13_4298 0.42 -0.0 4,815,454 - PfGW456L13_4298 0.42 +0.5 4,815,507 - PfGW456L13_4298 0.46 +1.5 4,815,551 - PfGW456L13_4298 0.50 +1.0 4,815,948 + PfGW456L13_4298 0.81 +1.4 4,815,949 - PfGW456L13_4298 0.81 -1.4 4,815,949 - PfGW456L13_4298 0.81 -0.1 4,816,023 + PfGW456L13_4298 0.87 +0.2 4,816,024 - PfGW456L13_4298 0.87 -2.7 4,816,114 + -0.9 4,816,115 - -0.1 4,816,178 + -2.0 4,816,179 - +0.3 4,816,194 + -0.4 4,816,598 - PfGW456L13_4299 0.29 -0.9 4,816,598 - PfGW456L13_4299 0.29 +0.4 4,816,664 + PfGW456L13_4299 0.34 -0.6 4,816,664 + PfGW456L13_4299 0.34 -2.8 4,817,132 - PfGW456L13_4299 0.67 +1.2
Or see this region's nucleotide sequence