Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4075 and PfGW456L13_4076 are separated by 277 nucleotides PfGW456L13_4076 and PfGW456L13_4077 are separated by 67 nucleotides PfGW456L13_4077 and PfGW456L13_4078 are separated by 123 nucleotides
PfGW456L13_4075 - Putative oxidoreductase YncB, at 4,573,473 to 4,574,504
_4075
PfGW456L13_4076 - FIG000557: hypothetical protein co-occurring with RecR, at 4,574,782 to 4,575,120
_4076
PfGW456L13_4077 - DNA polymerase III subunits gamma and tau (EC 2.7.7.7), at 4,575,188 to 4,577,269
_4077
PfGW456L13_4078 - FIG00953368: hypothetical protein, at 4,577,393 to 4,578,190
_4078
Position (kb)
4575
4576
4577
4578 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4574.347 kb on + strand, within PfGW456L13_4075 at 4574.348 kb on - strand, within PfGW456L13_4075 at 4574.423 kb on + strand at 4574.541 kb on + strand at 4574.541 kb on + strand at 4574.541 kb on + strand at 4574.541 kb on + strand at 4574.541 kb on + strand at 4574.541 kb on + strand at 4574.542 kb on - strand at 4574.542 kb on - strand at 4574.565 kb on - strand at 4574.580 kb on + strand at 4574.581 kb on - strand at 4574.581 kb on - strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.703 kb on + strand at 4574.704 kb on - strand at 4574.704 kb on - strand at 4574.704 kb on - strand at 4574.704 kb on - strand at 4574.704 kb on - strand at 4574.704 kb on - strand at 4574.704 kb on - strand at 4574.740 kb on - strand at 4574.756 kb on + strand at 4574.757 kb on - strand at 4575.124 kb on - strand at 4575.124 kb on - strand at 4575.138 kb on + strand at 4575.139 kb on - strand at 4575.139 kb on - strand at 4575.148 kb on - strand at 4575.186 kb on + strand at 4575.186 kb on + strand at 4575.187 kb on - strand at 4575.187 kb on - strand at 4575.190 kb on - strand at 4575.190 kb on - strand at 4575.190 kb on - strand at 4575.190 kb on - strand at 4575.190 kb on - strand at 4575.190 kb on - strand at 4575.224 kb on - strand at 4575.224 kb on - strand at 4575.224 kb on - strand at 4575.224 kb on - strand at 4575.224 kb on - strand at 4575.227 kb on - strand at 4577.311 kb on - strand at 4577.349 kb on + strand at 4577.349 kb on + strand at 4577.349 kb on + strand at 4577.350 kb on - strand at 4577.350 kb on - strand at 4577.350 kb on - strand at 4577.350 kb on - strand at 4577.350 kb on - strand at 4577.350 kb on - strand at 4577.358 kb on + strand at 4577.358 kb on + strand at 4577.393 kb on - strand at 4577.534 kb on + strand, within PfGW456L13_4078 at 4577.534 kb on + strand, within PfGW456L13_4078 at 4577.534 kb on + strand, within PfGW456L13_4078 at 4577.535 kb on - strand, within PfGW456L13_4078 at 4577.535 kb on - strand, within PfGW456L13_4078 at 4577.648 kb on + strand, within PfGW456L13_4078 at 4577.648 kb on + strand, within PfGW456L13_4078 at 4577.649 kb on - strand, within PfGW456L13_4078 at 4577.649 kb on - strand, within PfGW456L13_4078 at 4577.687 kb on + strand, within PfGW456L13_4078 at 4577.688 kb on - strand, within PfGW456L13_4078 at 4577.805 kb on - strand, within PfGW456L13_4078 at 4577.811 kb on - strand, within PfGW456L13_4078 at 4578.017 kb on + strand, within PfGW456L13_4078 at 4578.017 kb on + strand, within PfGW456L13_4078 at 4578.017 kb on + strand, within PfGW456L13_4078 at 4578.018 kb on - strand, within PfGW456L13_4078 at 4578.018 kb on - strand, within PfGW456L13_4078 at 4578.018 kb on - strand, within PfGW456L13_4078 at 4578.018 kb on - strand, within PfGW456L13_4078 at 4578.018 kb on - strand, within PfGW456L13_4078 at 4578.113 kb on + strand at 4578.113 kb on + strand at 4578.113 kb on + strand at 4578.113 kb on + strand at 4578.113 kb on + strand at 4578.113 kb on + strand at 4578.113 kb on + strand at 4578.113 kb on + strand at 4578.113 kb on + strand at 4578.114 kb on - strand at 4578.114 kb on - strand at 4578.114 kb on - strand at 4578.114 kb on - strand at 4578.114 kb on - strand at 4578.116 kb on - strand at 4578.143 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 4,574,347 + PfGW456L13_4075 0.85 -0.4 4,574,348 - PfGW456L13_4075 0.85 +0.6 4,574,423 + +0.1 4,574,541 + -0.4 4,574,541 + +0.5 4,574,541 + +1.2 4,574,541 + -3.5 4,574,541 + -1.5 4,574,541 + +1.2 4,574,542 - +0.3 4,574,542 - +1.5 4,574,565 - -1.7 4,574,580 + +0.7 4,574,581 - -3.1 4,574,581 - -2.5 4,574,703 + +1.1 4,574,703 + +0.3 4,574,703 + +2.6 4,574,703 + +2.4 4,574,703 + +0.2 4,574,703 + -0.7 4,574,703 + -0.3 4,574,703 + +0.9 4,574,703 + -0.1 4,574,703 + -0.1 4,574,703 + +0.1 4,574,704 - +0.6 4,574,704 - -0.0 4,574,704 - +0.2 4,574,704 - +0.4 4,574,704 - +0.2 4,574,704 - -0.8 4,574,704 - +0.1 4,574,740 - +1.5 4,574,756 + -0.0 4,574,757 - -0.1 4,575,124 - +2.2 4,575,124 - -0.9 4,575,138 + +2.2 4,575,139 - -2.8 4,575,139 - -1.7 4,575,148 - +1.4 4,575,186 + +0.4 4,575,186 + -2.3 4,575,187 - +0.4 4,575,187 - +1.0 4,575,190 - -0.2 4,575,190 - -0.3 4,575,190 - +1.1 4,575,190 - +0.1 4,575,190 - +0.3 4,575,190 - +0.8 4,575,224 - -2.5 4,575,224 - -0.3 4,575,224 - -2.0 4,575,224 - +0.6 4,575,224 - -2.2 4,575,227 - -0.7 4,577,311 - -1.0 4,577,349 + +2.7 4,577,349 + -2.8 4,577,349 + +0.9 4,577,350 - +0.3 4,577,350 - +0.8 4,577,350 - -2.5 4,577,350 - +0.8 4,577,350 - +0.2 4,577,350 - -0.2 4,577,358 + -0.5 4,577,358 + -3.0 4,577,393 - +0.8 4,577,534 + PfGW456L13_4078 0.18 +0.5 4,577,534 + PfGW456L13_4078 0.18 -0.3 4,577,534 + PfGW456L13_4078 0.18 +0.8 4,577,535 - PfGW456L13_4078 0.18 +0.2 4,577,535 - PfGW456L13_4078 0.18 -2.9 4,577,648 + PfGW456L13_4078 0.32 -1.3 4,577,648 + PfGW456L13_4078 0.32 -0.4 4,577,649 - PfGW456L13_4078 0.32 +1.5 4,577,649 - PfGW456L13_4078 0.32 -0.0 4,577,687 + PfGW456L13_4078 0.37 -0.7 4,577,688 - PfGW456L13_4078 0.37 -3.3 4,577,805 - PfGW456L13_4078 0.52 -4.4 4,577,811 - PfGW456L13_4078 0.52 +0.2 4,578,017 + PfGW456L13_4078 0.78 -1.5 4,578,017 + PfGW456L13_4078 0.78 -0.5 4,578,017 + PfGW456L13_4078 0.78 +0.6 4,578,018 - PfGW456L13_4078 0.78 -0.3 4,578,018 - PfGW456L13_4078 0.78 +1.1 4,578,018 - PfGW456L13_4078 0.78 +1.2 4,578,018 - PfGW456L13_4078 0.78 -0.0 4,578,018 - PfGW456L13_4078 0.78 -0.5 4,578,113 + -0.8 4,578,113 + -0.1 4,578,113 + -0.1 4,578,113 + -1.4 4,578,113 + -0.8 4,578,113 + -2.3 4,578,113 + +1.1 4,578,113 + -2.3 4,578,113 + +0.3 4,578,114 - +0.2 4,578,114 - -0.5 4,578,114 - +0.4 4,578,114 - +1.1 4,578,114 - +0.4 4,578,116 - -2.8 4,578,143 - -2.6
Or see this region's nucleotide sequence