Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4644
Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.58 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,556,362 | - | -0.8 | |||
5,556,362 | - | +0.4 | |||
5,556,409 | + | -1.0 | |||
5,557,377 | + | -0.8 | |||
5,557,381 | - | +0.4 | |||
5,557,381 | - | -0.2 | |||
5,557,390 | + | Echvi_4644 | 0.10 | -0.0 | |
5,557,468 | + | Echvi_4644 | 0.32 | -1.1 | |
5,557,469 | - | Echvi_4644 | 0.33 | -0.3 | |
5,557,519 | + | Echvi_4644 | 0.47 | -0.6 | |
5,557,588 | - | Echvi_4644 | 0.66 | -0.7 | |
5,557,621 | - | Echvi_4644 | 0.76 | +0.1 | |
5,557,622 | + | Echvi_4644 | 0.76 | -1.0 | |
5,557,712 | - | -1.5 | |||
5,557,728 | + | +0.6 | |||
5,557,756 | - | -0.2 | |||
5,557,775 | - | +0.4 | |||
5,557,775 | - | -0.1 | |||
5,557,809 | + | -1.1 | |||
5,557,810 | - | +1.1 | |||
5,557,829 | + | -0.2 | |||
5,557,936 | - | +1.5 | |||
5,558,428 | + | Echvi_4645 | 0.33 | -2.1 |
Or see this region's nucleotide sequence