Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4249

Experiment: m.b. benzoic 0.58 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. benzoic 0.58 mg/ml
5,096,560	-				+0.7
5,096,618	-				-0.3
5,096,658	+				-0.6
5,096,699	-				+0.3
5,096,699	-				-0.9
5,096,754	+		Echvi_4247	0.20	-2.1
5,096,776	-		Echvi_4247	0.26	+0.2
5,096,805	+		Echvi_4247	0.33	-1.0
5,096,805	+		Echvi_4247	0.33	+1.5
5,096,805	+		Echvi_4247	0.33	-0.2
5,096,806	-		Echvi_4247	0.34	+0.0
5,096,806	-		Echvi_4247	0.34	-0.6
5,096,807	+		Echvi_4247	0.34	+0.6
5,096,807	+		Echvi_4247	0.34	+0.1
5,096,807	+		Echvi_4247	0.34	-1.2
5,096,809	+		Echvi_4247	0.34	-1.0
5,096,809	+		Echvi_4247	0.34	-1.0
5,096,809	+		Echvi_4247	0.34	-1.1
5,096,810	-		Echvi_4247	0.35	+0.5
5,096,810	-		Echvi_4247	0.35	-1.3
5,096,854	+		Echvi_4247	0.46	-2.0
5,096,855	-		Echvi_4247	0.46	+1.0
5,096,908	+		Echvi_4247	0.60	+0.2
5,096,930	+		Echvi_4247	0.66	-0.4
5,096,930	+		Echvi_4247	0.66	-0.1
5,096,931	-		Echvi_4247	0.66	-0.3
5,096,971	+		Echvi_4247	0.77	-0.7
5,096,972	-		Echvi_4247	0.77	-0.6
5,096,972	-		Echvi_4247	0.77	-0.3
5,097,016	+		Echvi_4247	0.88	-1.2
5,097,018	+		Echvi_4247	0.89	+2.9
5,097,018	+		Echvi_4247	0.89	-0.0
5,097,019	-		Echvi_4247	0.89	-0.9
5,097,020	-		Echvi_4247	0.89	-0.5
5,097,073	+		Echvi_4248	0.26	-1.0
5,097,073	+		Echvi_4248	0.26	+0.2
5,097,073	+		Echvi_4248	0.26	-0.3
5,097,107	+		Echvi_4248	0.47	+0.5
5,097,107	+		Echvi_4248	0.47	-0.7
5,097,177	+				-1.0
5,097,178	-				-0.2
5,097,178	-				-0.3
5,097,180	-				+1.2
5,097,188	+				+0.1
5,097,189	-				-0.2
5,097,213	+				-1.9
5,097,213	+				+1.1
5,097,457	+				+0.0
5,097,457	+				-0.6
5,097,457	+				-2.1
5,097,461	+				+0.4
5,097,461	+				-0.1
5,097,461	+				-1.7
5,097,461	+				+0.0
5,097,462	-				-1.1
5,097,462	-				-0.8
5,097,462	-				+0.3
5,097,462	-				-1.5
5,097,463	+				-0.2
5,097,464	-				-0.6
5,097,464	-				-0.7
5,097,464	-				+0.6
5,097,466	+				+0.9
5,097,538	+				+0.0
5,097,541	+				-1.1
5,097,611	+		Echvi_4249	0.13	-0.4
5,097,621	+		Echvi_4249	0.16	-1.2
5,097,621	+		Echvi_4249	0.16	-1.6
5,097,646	-		Echvi_4249	0.22	+1.0
5,097,675	+		Echvi_4249	0.29	-0.6
5,097,743	+		Echvi_4249	0.46	-0.2
5,097,887	+		Echvi_4249	0.83	-2.0
5,097,931	-				+0.7
5,098,009	+				-0.9
5,098,009	+				-0.4
5,098,009	+				-0.1
5,098,010	-				-1.3
5,098,011	+				+0.7
5,098,011	+				-1.4
5,098,012	-				-0.0
5,098,033	+				-0.9
5,098,171	-		Echvi_4250	0.30	-0.7
5,098,171	-		Echvi_4250	0.30	-0.7
5,098,174	+		Echvi_4250	0.30	+0.3
5,098,174	+		Echvi_4250	0.30	-0.4
5,098,174	+		Echvi_4250	0.30	+0.0
5,098,175	-		Echvi_4250	0.31	-1.6
5,098,175	-		Echvi_4250	0.31	-0.5
5,098,175	-		Echvi_4250	0.31	-0.3
5,098,175	-		Echvi_4250	0.31	+0.9
5,098,183	-		Echvi_4250	0.32	-0.1
5,098,189	+		Echvi_4250	0.34	+1.3
5,098,190	-		Echvi_4250	0.34	-0.7
5,098,190	-		Echvi_4250	0.34	+0.1
5,098,339	+		Echvi_4250	0.68	-0.1
5,098,340	-		Echvi_4250	0.69	+0.0
5,098,341	+		Echvi_4250	0.69	+0.1
5,098,366	-		Echvi_4250	0.74	+0.4
5,098,437	+				+0.5
5,098,438	-				+0.1
5,098,440	+				+0.3
5,098,496	+				-1.3
5,098,496	+				+0.7
5,098,497	-				-0.4
5,098,507	+				+0.5
5,098,507	+				+1.7
5,098,510	+				+0.0
5,098,510	+				-0.2
5,098,510	+				+0.8
5,098,539	+				+0.5
5,098,549	+				-1.1
5,098,549	+				+0.6
5,098,550	-				-0.4
5,098,550	-				+0.8
5,098,550	-				+1.3
5,098,550	-				+0.7
5,098,552	+				+0.9
5,098,553	-				-0.4
5,098,560	+				+0.1
5,098,580	+				+1.2
5,098,581	-				+0.4
5,098,660	-				-0.7
5,098,679	+				-1.3
5,098,680	-				+0.4
5,098,697	-				-1.3
5,098,697	-				-0.3
5,098,701	+				+0.3
5,098,702	-				-0.5
5,098,782	-				-1.1
5,098,826	-				-0.4
5,098,919	-		Echvi_4251	0.18	-0.5