Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3131 and Echvi_3132 are separated by 175 nucleotides Echvi_3132 and Echvi_3133 are separated by 160 nucleotides
Echvi_3131: Echvi_3131 - Arginase/agmatinase/formimionoglutamate hydrolase, arginase family, at 3,743,477 to 3,744,547
_3131
Echvi_3132: Echvi_3132 - Phosphohistidine phosphatase SixA, at 3,744,723 to 3,745,202
_3132
Echvi_3133: Echvi_3133 - DNA topoisomerase I, bacterial, at 3,745,363 to 3,747,684
_3133
Position (kb)
3744
3745
3746 Strain fitness (log2 ratio)
-2
-1
0
1 at 3743.735 kb on - strand, within Echvi_3131 at 3743.735 kb on - strand, within Echvi_3131 at 3743.765 kb on + strand, within Echvi_3131 at 3743.802 kb on + strand, within Echvi_3131 at 3743.802 kb on + strand, within Echvi_3131 at 3743.819 kb on - strand, within Echvi_3131 at 3743.845 kb on + strand, within Echvi_3131 at 3744.005 kb on + strand, within Echvi_3131 at 3744.015 kb on - strand, within Echvi_3131 at 3744.052 kb on + strand, within Echvi_3131 at 3744.070 kb on + strand, within Echvi_3131 at 3744.071 kb on - strand, within Echvi_3131 at 3744.071 kb on - strand, within Echvi_3131 at 3744.132 kb on + strand, within Echvi_3131 at 3744.237 kb on + strand, within Echvi_3131 at 3744.271 kb on + strand, within Echvi_3131 at 3744.276 kb on + strand, within Echvi_3131 at 3744.277 kb on - strand, within Echvi_3131 at 3744.301 kb on + strand, within Echvi_3131 at 3744.564 kb on + strand at 3744.615 kb on - strand at 3744.616 kb on + strand at 3744.617 kb on - strand at 3744.663 kb on - strand at 3744.732 kb on + strand at 3744.732 kb on + strand at 3744.758 kb on + strand at 3744.827 kb on + strand, within Echvi_3132 at 3744.827 kb on + strand, within Echvi_3132 at 3744.828 kb on - strand, within Echvi_3132 at 3744.847 kb on + strand, within Echvi_3132 at 3744.848 kb on - strand, within Echvi_3132 at 3744.888 kb on + strand, within Echvi_3132 at 3744.888 kb on + strand, within Echvi_3132 at 3744.889 kb on - strand, within Echvi_3132 at 3744.889 kb on - strand, within Echvi_3132 at 3744.896 kb on + strand, within Echvi_3132 at 3744.896 kb on + strand, within Echvi_3132 at 3744.897 kb on - strand, within Echvi_3132 at 3744.897 kb on - strand, within Echvi_3132 at 3744.897 kb on - strand, within Echvi_3132 at 3745.063 kb on - strand, within Echvi_3132 at 3745.189 kb on - strand at 3745.192 kb on - strand at 3745.192 kb on - strand at 3745.215 kb on - strand at 3745.248 kb on + strand at 3745.297 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 3,743,735 - Echvi_3131 0.24 +0.3 3,743,735 - Echvi_3131 0.24 -0.9 3,743,765 + Echvi_3131 0.27 +0.8 3,743,802 + Echvi_3131 0.30 +0.4 3,743,802 + Echvi_3131 0.30 -0.2 3,743,819 - Echvi_3131 0.32 -1.2 3,743,845 + Echvi_3131 0.34 +0.8 3,744,005 + Echvi_3131 0.49 -1.1 3,744,015 - Echvi_3131 0.50 +0.0 3,744,052 + Echvi_3131 0.54 +0.6 3,744,070 + Echvi_3131 0.55 +0.3 3,744,071 - Echvi_3131 0.55 -0.5 3,744,071 - Echvi_3131 0.55 -0.2 3,744,132 + Echvi_3131 0.61 +1.2 3,744,237 + Echvi_3131 0.71 +0.2 3,744,271 + Echvi_3131 0.74 +1.7 3,744,276 + Echvi_3131 0.75 -0.4 3,744,277 - Echvi_3131 0.75 +0.4 3,744,301 + Echvi_3131 0.77 -0.6 3,744,564 + -1.6 3,744,615 - -0.4 3,744,616 + +0.2 3,744,617 - +1.6 3,744,663 - -0.2 3,744,732 + +0.7 3,744,732 + +0.4 3,744,758 + +0.2 3,744,827 + Echvi_3132 0.22 +1.0 3,744,827 + Echvi_3132 0.22 -0.4 3,744,828 - Echvi_3132 0.22 -1.2 3,744,847 + Echvi_3132 0.26 -0.7 3,744,848 - Echvi_3132 0.26 -0.4 3,744,888 + Echvi_3132 0.34 -1.9 3,744,888 + Echvi_3132 0.34 -0.6 3,744,889 - Echvi_3132 0.35 -1.9 3,744,889 - Echvi_3132 0.35 -1.6 3,744,896 + Echvi_3132 0.36 -1.5 3,744,896 + Echvi_3132 0.36 -0.2 3,744,897 - Echvi_3132 0.36 -0.2 3,744,897 - Echvi_3132 0.36 +1.0 3,744,897 - Echvi_3132 0.36 -0.7 3,745,063 - Echvi_3132 0.71 -1.0 3,745,189 - -0.8 3,745,192 - -1.0 3,745,192 - -0.3 3,745,215 - -1.0 3,745,248 + -0.9 3,745,297 + -1.9
Or see this region's nucleotide sequence