Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0818 and Echvi_0819 are separated by 435 nucleotides Echvi_0819 and Echvi_0820 are separated by 116 nucleotides Echvi_0820 and Echvi_0821 are separated by 71 nucleotides Echvi_0821 and Echvi_0822 are separated by 6 nucleotides
Echvi_0818: Echvi_0818 - Uncharacterized conserved protein, at 935,563 to 936,705
_0818
Echvi_0819: Echvi_0819 - Predicted signal-transduction protein containing cAMP-binding and CBS domains, at 937,141 to 937,662
_0819
Echvi_0820: Echvi_0820 - Membrane transporters of cations and cationic drugs, at 937,779 to 938,108
_0820
Echvi_0821: Echvi_0821 - Acetyltransferases, at 938,180 to 938,578
_0821
Echvi_0822: Echvi_0822 - Acetyltransferases, at 938,585 to 939,103
_0822
Position (kb) 937
938 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 936.161 kb on + strand, within Echvi_0818 at 936.162 kb on - strand, within Echvi_0818 at 936.170 kb on + strand, within Echvi_0818 at 936.171 kb on - strand, within Echvi_0818 at 936.252 kb on + strand, within Echvi_0818 at 936.253 kb on - strand, within Echvi_0818 at 936.270 kb on + strand, within Echvi_0818 at 936.271 kb on - strand, within Echvi_0818 at 936.271 kb on - strand, within Echvi_0818 at 936.271 kb on - strand, within Echvi_0818 at 936.271 kb on - strand, within Echvi_0818 at 936.271 kb on - strand, within Echvi_0818 at 936.271 kb on - strand, within Echvi_0818 at 936.304 kb on + strand, within Echvi_0818 at 936.305 kb on - strand, within Echvi_0818 at 936.305 kb on - strand, within Echvi_0818 at 936.305 kb on - strand, within Echvi_0818 at 936.307 kb on + strand, within Echvi_0818 at 936.307 kb on + strand, within Echvi_0818 at 936.308 kb on - strand, within Echvi_0818 at 936.308 kb on - strand, within Echvi_0818 at 936.308 kb on - strand, within Echvi_0818 at 936.347 kb on + strand, within Echvi_0818 at 936.347 kb on + strand, within Echvi_0818 at 936.348 kb on - strand, within Echvi_0818 at 936.348 kb on - strand, within Echvi_0818 at 936.411 kb on - strand, within Echvi_0818 at 936.459 kb on + strand, within Echvi_0818 at 936.489 kb on - strand, within Echvi_0818 at 936.496 kb on - strand, within Echvi_0818 at 936.500 kb on + strand, within Echvi_0818 at 936.501 kb on - strand, within Echvi_0818 at 936.524 kb on + strand, within Echvi_0818 at 936.525 kb on - strand, within Echvi_0818 at 936.595 kb on - strand at 936.657 kb on - strand at 936.680 kb on + strand at 936.680 kb on + strand at 936.681 kb on - strand at 936.720 kb on + strand at 936.720 kb on + strand at 936.721 kb on - strand at 936.768 kb on - strand at 936.768 kb on - strand at 936.906 kb on + strand at 936.907 kb on - strand at 936.907 kb on - strand at 936.907 kb on - strand at 936.947 kb on + strand at 936.979 kb on + strand at 936.979 kb on + strand at 936.984 kb on + strand at 937.002 kb on - strand at 937.002 kb on - strand at 937.012 kb on + strand at 937.012 kb on + strand at 937.020 kb on - strand at 937.053 kb on + strand at 937.071 kb on + strand at 937.072 kb on - strand at 937.087 kb on - strand at 937.087 kb on - strand at 937.091 kb on + strand at 937.149 kb on - strand at 937.226 kb on - strand, within Echvi_0819 at 937.226 kb on - strand, within Echvi_0819 at 937.241 kb on - strand, within Echvi_0819 at 937.280 kb on - strand, within Echvi_0819 at 937.306 kb on - strand, within Echvi_0819 at 937.376 kb on + strand, within Echvi_0819 at 937.387 kb on - strand, within Echvi_0819 at 937.411 kb on + strand, within Echvi_0819 at 937.411 kb on + strand, within Echvi_0819 at 937.411 kb on + strand, within Echvi_0819 at 937.411 kb on + strand, within Echvi_0819 at 937.411 kb on + strand, within Echvi_0819 at 937.411 kb on + strand, within Echvi_0819 at 937.412 kb on - strand, within Echvi_0819 at 937.412 kb on - strand, within Echvi_0819 at 937.413 kb on + strand, within Echvi_0819 at 937.414 kb on - strand, within Echvi_0819 at 937.414 kb on - strand, within Echvi_0819 at 937.415 kb on + strand, within Echvi_0819 at 937.415 kb on + strand, within Echvi_0819 at 937.415 kb on + strand, within Echvi_0819 at 937.415 kb on + strand, within Echvi_0819 at 937.415 kb on + strand, within Echvi_0819 at 937.415 kb on + strand, within Echvi_0819 at 937.415 kb on + strand, within Echvi_0819 at 937.415 kb on + strand, within Echvi_0819 at 937.415 kb on + strand, within Echvi_0819 at 937.415 kb on + strand, within Echvi_0819 at 937.416 kb on - strand, within Echvi_0819 at 937.416 kb on - strand, within Echvi_0819 at 937.416 kb on - strand, within Echvi_0819 at 937.416 kb on - strand, within Echvi_0819 at 937.416 kb on - strand, within Echvi_0819 at 937.416 kb on - strand, within Echvi_0819 at 937.422 kb on - strand, within Echvi_0819 at 937.436 kb on + strand, within Echvi_0819 at 937.585 kb on + strand, within Echvi_0819 at 937.615 kb on + strand at 937.639 kb on + strand at 937.649 kb on + strand at 937.653 kb on + strand at 937.658 kb on - strand at 937.658 kb on - strand at 937.701 kb on - strand at 937.701 kb on - strand at 937.705 kb on - strand at 937.800 kb on - strand at 937.810 kb on + strand at 937.811 kb on - strand at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.873 kb on - strand, within Echvi_0820 at 937.873 kb on - strand, within Echvi_0820 at 937.873 kb on - strand, within Echvi_0820 at 937.873 kb on - strand, within Echvi_0820 at 937.873 kb on - strand, within Echvi_0820 at 937.876 kb on + strand, within Echvi_0820 at 937.877 kb on - strand, within Echvi_0820 at 937.914 kb on - strand, within Echvi_0820 at 937.921 kb on + strand, within Echvi_0820 at 937.963 kb on - strand, within Echvi_0820 at 938.015 kb on + strand, within Echvi_0820 at 938.015 kb on + strand, within Echvi_0820 at 938.015 kb on + strand, within Echvi_0820 at 938.016 kb on - strand, within Echvi_0820 at 938.018 kb on - strand, within Echvi_0820 at 938.021 kb on + strand, within Echvi_0820 at 938.021 kb on + strand, within Echvi_0820 at 938.032 kb on + strand, within Echvi_0820 at 938.068 kb on + strand, within Echvi_0820 at 938.069 kb on - strand, within Echvi_0820 at 938.069 kb on - strand, within Echvi_0820 at 938.117 kb on - strand at 938.121 kb on - strand at 938.121 kb on - strand at 938.122 kb on + strand at 938.122 kb on + strand at 938.122 kb on + strand at 938.123 kb on - strand at 938.123 kb on - strand at 938.123 kb on - strand at 938.128 kb on + strand at 938.128 kb on + strand at 938.128 kb on + strand at 938.128 kb on + strand at 938.129 kb on - strand at 938.129 kb on - strand at 938.131 kb on - strand at 938.131 kb on - strand at 938.197 kb on - strand at 938.207 kb on + strand at 938.207 kb on + strand at 938.208 kb on - strand at 938.222 kb on - strand, within Echvi_0821 at 938.239 kb on - strand, within Echvi_0821 at 938.313 kb on + strand, within Echvi_0821 at 938.317 kb on + strand, within Echvi_0821 at 938.317 kb on + strand, within Echvi_0821 at 938.317 kb on + strand, within Echvi_0821 at 938.318 kb on - strand, within Echvi_0821 at 938.318 kb on - strand, within Echvi_0821 at 938.318 kb on - strand, within Echvi_0821 at 938.323 kb on + strand, within Echvi_0821 at 938.323 kb on + strand, within Echvi_0821 at 938.323 kb on + strand, within Echvi_0821 at 938.323 kb on + strand, within Echvi_0821 at 938.324 kb on - strand, within Echvi_0821 at 938.324 kb on - strand, within Echvi_0821 at 938.324 kb on - strand, within Echvi_0821 at 938.327 kb on + strand, within Echvi_0821 at 938.327 kb on + strand, within Echvi_0821 at 938.331 kb on - strand, within Echvi_0821 at 938.331 kb on - strand, within Echvi_0821 at 938.331 kb on - strand, within Echvi_0821 at 938.343 kb on - strand, within Echvi_0821 at 938.344 kb on + strand, within Echvi_0821 at 938.344 kb on + strand, within Echvi_0821 at 938.344 kb on + strand, within Echvi_0821 at 938.344 kb on + strand, within Echvi_0821 at 938.345 kb on - strand, within Echvi_0821 at 938.468 kb on - strand, within Echvi_0821 at 938.468 kb on - strand, within Echvi_0821 at 938.519 kb on + strand, within Echvi_0821 at 938.520 kb on - strand, within Echvi_0821 at 938.561 kb on + strand at 938.562 kb on - strand at 938.572 kb on + strand at 938.596 kb on - strand at 938.644 kb on + strand, within Echvi_0822
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 936,161 + Echvi_0818 0.52 +1.3 936,162 - Echvi_0818 0.52 -0.7 936,170 + Echvi_0818 0.53 +0.9 936,171 - Echvi_0818 0.53 +0.3 936,252 + Echvi_0818 0.60 +1.9 936,253 - Echvi_0818 0.60 -1.6 936,270 + Echvi_0818 0.62 -0.2 936,271 - Echvi_0818 0.62 -1.5 936,271 - Echvi_0818 0.62 -1.1 936,271 - Echvi_0818 0.62 -2.8 936,271 - Echvi_0818 0.62 -1.8 936,271 - Echvi_0818 0.62 -0.9 936,271 - Echvi_0818 0.62 -0.4 936,304 + Echvi_0818 0.65 -0.1 936,305 - Echvi_0818 0.65 -0.4 936,305 - Echvi_0818 0.65 +0.6 936,305 - Echvi_0818 0.65 +0.9 936,307 + Echvi_0818 0.65 -2.6 936,307 + Echvi_0818 0.65 +0.1 936,308 - Echvi_0818 0.65 -2.5 936,308 - Echvi_0818 0.65 -0.9 936,308 - Echvi_0818 0.65 -1.2 936,347 + Echvi_0818 0.69 +2.5 936,347 + Echvi_0818 0.69 -1.0 936,348 - Echvi_0818 0.69 -1.4 936,348 - Echvi_0818 0.69 -0.8 936,411 - Echvi_0818 0.74 -0.1 936,459 + Echvi_0818 0.78 +2.6 936,489 - Echvi_0818 0.81 -0.9 936,496 - Echvi_0818 0.82 -1.8 936,500 + Echvi_0818 0.82 -0.1 936,501 - Echvi_0818 0.82 -0.1 936,524 + Echvi_0818 0.84 -0.7 936,525 - Echvi_0818 0.84 -1.9 936,595 - -0.9 936,657 - -0.8 936,680 + +0.9 936,680 + -1.2 936,681 - -2.7 936,720 + +0.6 936,720 + +0.1 936,721 - -0.8 936,768 - +0.1 936,768 - +2.3 936,906 + +0.3 936,907 - -0.3 936,907 - -1.2 936,907 - -1.7 936,947 + -0.9 936,979 + +0.0 936,979 + +0.3 936,984 + -0.8 937,002 - -0.9 937,002 - -0.2 937,012 + +0.1 937,012 + +0.1 937,020 - -0.6 937,053 + -1.2 937,071 + -0.6 937,072 - -1.2 937,087 - -1.4 937,087 - -0.1 937,091 + -0.3 937,149 - -0.4 937,226 - Echvi_0819 0.16 -2.2 937,226 - Echvi_0819 0.16 -0.0 937,241 - Echvi_0819 0.19 -0.7 937,280 - Echvi_0819 0.27 -0.7 937,306 - Echvi_0819 0.32 -0.8 937,376 + Echvi_0819 0.45 -1.9 937,387 - Echvi_0819 0.47 -1.5 937,411 + Echvi_0819 0.52 -0.4 937,411 + Echvi_0819 0.52 -0.1 937,411 + Echvi_0819 0.52 +0.4 937,411 + Echvi_0819 0.52 -0.4 937,411 + Echvi_0819 0.52 +0.6 937,411 + Echvi_0819 0.52 +0.8 937,412 - Echvi_0819 0.52 -1.1 937,412 - Echvi_0819 0.52 -0.4 937,413 + Echvi_0819 0.52 +0.3 937,414 - Echvi_0819 0.52 -0.1 937,414 - Echvi_0819 0.52 -2.5 937,415 + Echvi_0819 0.52 -0.3 937,415 + Echvi_0819 0.52 +1.8 937,415 + Echvi_0819 0.52 +0.1 937,415 + Echvi_0819 0.52 -2.3 937,415 + Echvi_0819 0.52 +1.1 937,415 + Echvi_0819 0.52 +0.0 937,415 + Echvi_0819 0.52 -0.8 937,415 + Echvi_0819 0.52 -0.1 937,415 + Echvi_0819 0.52 -0.1 937,415 + Echvi_0819 0.52 +0.5 937,416 - Echvi_0819 0.53 -1.3 937,416 - Echvi_0819 0.53 +0.1 937,416 - Echvi_0819 0.53 -2.3 937,416 - Echvi_0819 0.53 -0.6 937,416 - Echvi_0819 0.53 -1.0 937,416 - Echvi_0819 0.53 -2.6 937,422 - Echvi_0819 0.54 -0.9 937,436 + Echvi_0819 0.57 +0.9 937,585 + Echvi_0819 0.85 -0.1 937,615 + -0.1 937,639 + +0.5 937,649 + +0.4 937,653 + -0.4 937,658 - -1.9 937,658 - -1.6 937,701 - -1.3 937,701 - -0.4 937,705 - -0.5 937,800 - -1.4 937,810 + +0.1 937,811 - -0.3 937,872 + Echvi_0820 0.28 +0.6 937,872 + Echvi_0820 0.28 -0.5 937,872 + Echvi_0820 0.28 -0.3 937,872 + Echvi_0820 0.28 -0.2 937,872 + Echvi_0820 0.28 +1.1 937,872 + Echvi_0820 0.28 +1.4 937,872 + Echvi_0820 0.28 -0.5 937,872 + Echvi_0820 0.28 -1.7 937,872 + Echvi_0820 0.28 +0.1 937,872 + Echvi_0820 0.28 -1.8 937,873 - Echvi_0820 0.28 -1.7 937,873 - Echvi_0820 0.28 -0.6 937,873 - Echvi_0820 0.28 -1.4 937,873 - Echvi_0820 0.28 -0.9 937,873 - Echvi_0820 0.28 -0.9 937,876 + Echvi_0820 0.29 +1.0 937,877 - Echvi_0820 0.30 -1.1 937,914 - Echvi_0820 0.41 +2.2 937,921 + Echvi_0820 0.43 +0.1 937,963 - Echvi_0820 0.56 -2.5 938,015 + Echvi_0820 0.72 -0.4 938,015 + Echvi_0820 0.72 +0.9 938,015 + Echvi_0820 0.72 -0.3 938,016 - Echvi_0820 0.72 -0.9 938,018 - Echvi_0820 0.72 -1.7 938,021 + Echvi_0820 0.73 +0.9 938,021 + Echvi_0820 0.73 +1.7 938,032 + Echvi_0820 0.77 +0.3 938,068 + Echvi_0820 0.88 +1.5 938,069 - Echvi_0820 0.88 -0.2 938,069 - Echvi_0820 0.88 -1.8 938,117 - -1.5 938,121 - -0.4 938,121 - -1.8 938,122 + -1.2 938,122 + +0.5 938,122 + +1.3 938,123 - -1.6 938,123 - -1.0 938,123 - -0.7 938,128 + -0.4 938,128 + -0.9 938,128 + +0.6 938,128 + +0.5 938,129 - -2.4 938,129 - +0.9 938,131 - -1.0 938,131 - -1.4 938,197 - -1.4 938,207 + -0.1 938,207 + -0.9 938,208 - -0.7 938,222 - Echvi_0821 0.11 -1.2 938,239 - Echvi_0821 0.15 -0.4 938,313 + Echvi_0821 0.33 -1.6 938,317 + Echvi_0821 0.34 -1.4 938,317 + Echvi_0821 0.34 -0.9 938,317 + Echvi_0821 0.34 -0.1 938,318 - Echvi_0821 0.35 -1.7 938,318 - Echvi_0821 0.35 -0.4 938,318 - Echvi_0821 0.35 +0.6 938,323 + Echvi_0821 0.36 -1.6 938,323 + Echvi_0821 0.36 +0.4 938,323 + Echvi_0821 0.36 -0.8 938,323 + Echvi_0821 0.36 -0.1 938,324 - Echvi_0821 0.36 -1.1 938,324 - Echvi_0821 0.36 -0.4 938,324 - Echvi_0821 0.36 -1.3 938,327 + Echvi_0821 0.37 -0.9 938,327 + Echvi_0821 0.37 -0.6 938,331 - Echvi_0821 0.38 -0.4 938,331 - Echvi_0821 0.38 -1.4 938,331 - Echvi_0821 0.38 -2.5 938,343 - Echvi_0821 0.41 -1.6 938,344 + Echvi_0821 0.41 -1.3 938,344 + Echvi_0821 0.41 -0.3 938,344 + Echvi_0821 0.41 -0.1 938,344 + Echvi_0821 0.41 +0.4 938,345 - Echvi_0821 0.41 -1.3 938,468 - Echvi_0821 0.72 -0.6 938,468 - Echvi_0821 0.72 -0.4 938,519 + Echvi_0821 0.85 +0.7 938,520 - Echvi_0821 0.85 +0.5 938,561 + -2.0 938,562 - -0.9 938,572 + +0.6 938,596 - -0.7 938,644 + Echvi_0822 0.11 +0.2
Or see this region's nucleotide sequence