Strain Fitness in Escherichia coli BW25113 around b4571
Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 7.5 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,098,432 | - | gnd | b2029 | 0.39 | +0.4 |
| 2,098,439 | + | gnd | b2029 | 0.39 | +0.9 |
| 2,098,622 | - | gnd | b2029 | 0.52 | +0.1 |
| 2,098,627 | - | gnd | b2029 | 0.53 | +0.4 |
| 2,098,627 | - | gnd | b2029 | 0.53 | -0.9 |
| 2,098,674 | - | gnd | b2029 | 0.56 | +0.0 |
| 2,098,688 | + | gnd | b2029 | 0.57 | +1.0 |
| 2,098,688 | + | gnd | b2029 | 0.57 | +0.8 |
| 2,098,744 | + | gnd | b2029 | 0.61 | +0.8 |
| 2,098,753 | - | gnd | b2029 | 0.62 | -0.6 |
| 2,098,779 | + | gnd | b2029 | 0.63 | +0.8 |
| 2,098,782 | - | gnd | b2029 | 0.64 | -1.2 |
| 2,098,809 | - | gnd | b2029 | 0.66 | -1.5 |
| 2,098,809 | - | gnd | b2029 | 0.66 | -0.8 |
| 2,098,872 | + | gnd | b2029 | 0.70 | -0.4 |
| 2,099,010 | + | gnd | b2029 | 0.80 | +0.9 |
| 2,099,134 | - | gnd | b2029 | 0.89 | -0.8 |
| 2,099,242 | + | +0.7 | |||
| 2,099,248 | + | +0.8 | |||
| 2,099,261 | - | +0.6 | |||
| 2,099,264 | - | -0.2 | |||
| 2,099,264 | - | +0.2 | |||
| 2,099,264 | - | +0.0 | |||
| 2,099,303 | + | +1.2 | |||
| 2,099,307 | - | +0.8 | |||
| 2,099,307 | - | +1.5 | |||
| 2,099,308 | + | +1.3 | |||
| 2,099,311 | - | +0.3 | |||
| 2,099,336 | + | -0.6 | |||
| 2,099,336 | + | -0.8 | |||
| 2,099,387 | + | +0.6 | |||
| 2,099,387 | + | -0.2 | |||
| 2,099,398 | - | +1.1 | |||
| 2,099,561 | - | wbbL | b4571 | 0.40 | -0.6 |
| 2,099,665 | + | wbbL | b4571 | 0.70 | -0.1 |
| 2,099,674 | - | wbbL | b4571 | 0.73 | -1.1 |
| 2,099,710 | - | wbbL | b4571 | 0.83 | +1.4 |
| 2,099,720 | + | wbbL | b4571 | 0.86 | -1.0 |
| 2,099,784 | - | +1.1 | |||
| 2,099,812 | - | -0.2 | |||
| 2,099,812 | - | +0.5 |
Or see this region's nucleotide sequence