Strain Fitness in Escherichia coli BW25113 around b2172
Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 7.5 vol% |
---|---|---|---|---|---|
remove | |||||
2,263,286 | - | yeiW | b4502 | 0.87 | +0.8 |
2,263,321 | - | -0.7 | |||
2,263,563 | + | yeiP | b2171 | 0.16 | -1.5 |
2,263,563 | + | yeiP | b2171 | 0.16 | +1.8 |
2,263,575 | + | yeiP | b2171 | 0.18 | +2.1 |
2,263,743 | - | yeiP | b2171 | 0.47 | +0.8 |
2,263,813 | + | yeiP | b2171 | 0.60 | +0.1 |
2,263,826 | + | yeiP | b2171 | 0.62 | -0.2 |
2,263,826 | + | yeiP | b2171 | 0.62 | -0.3 |
2,263,908 | - | yeiP | b2171 | 0.76 | +0.2 |
2,263,929 | - | yeiP | b2171 | 0.80 | +0.4 |
2,263,960 | - | yeiP | b2171 | 0.85 | +0.4 |
2,264,034 | - | -2.2 | |||
2,264,039 | + | +0.4 | |||
2,264,174 | - | +1.4 | |||
2,264,184 | - | +0.3 | |||
2,264,228 | - | +0.5 | |||
2,264,233 | + | +0.1 | |||
2,264,272 | - | -1.2 | |||
2,264,316 | - | +0.8 | |||
2,264,316 | - | -1.2 | |||
2,264,482 | - | yeiQ | b2172 | 0.15 | -0.6 |
2,264,482 | - | yeiQ | b2172 | 0.15 | +1.0 |
2,264,497 | + | yeiQ | b2172 | 0.16 | -0.8 |
2,264,497 | + | yeiQ | b2172 | 0.16 | +0.6 |
2,264,497 | + | yeiQ | b2172 | 0.16 | -0.2 |
2,264,505 | - | yeiQ | b2172 | 0.16 | +0.2 |
2,264,565 | + | yeiQ | b2172 | 0.20 | +0.3 |
2,264,565 | + | yeiQ | b2172 | 0.20 | -1.0 |
2,264,672 | - | yeiQ | b2172 | 0.28 | +0.7 |
2,264,946 | + | yeiQ | b2172 | 0.46 | +0.5 |
2,264,946 | + | yeiQ | b2172 | 0.46 | -2.2 |
2,265,000 | - | yeiQ | b2172 | 0.50 | +1.2 |
2,265,000 | - | yeiQ | b2172 | 0.50 | -1.1 |
2,265,002 | - | yeiQ | b2172 | 0.50 | +0.4 |
2,265,069 | - | yeiQ | b2172 | 0.55 | -0.7 |
2,265,069 | - | yeiQ | b2172 | 0.55 | +0.4 |
2,265,167 | + | yeiQ | b2172 | 0.61 | -0.8 |
2,265,167 | + | yeiQ | b2172 | 0.61 | -1.3 |
2,265,252 | - | yeiQ | b2172 | 0.67 | +1.6 |
2,265,271 | + | yeiQ | b2172 | 0.68 | +0.7 |
2,265,379 | + | yeiQ | b2172 | 0.76 | +1.4 |
2,265,379 | - | yeiQ | b2172 | 0.76 | -0.1 |
2,265,455 | + | yeiQ | b2172 | 0.81 | -0.5 |
2,265,455 | + | yeiQ | b2172 | 0.81 | +1.8 |
2,265,488 | - | yeiQ | b2172 | 0.83 | +0.5 |
2,265,694 | - | +1.0 | |||
2,265,889 | + | -0.3 | |||
2,266,013 | + | yeiR | b2173 | 0.16 | +2.4 |
2,266,036 | + | yeiR | b2173 | 0.19 | +0.5 |
2,266,036 | + | yeiR | b2173 | 0.19 | +1.4 |
2,266,075 | + | yeiR | b2173 | 0.23 | +0.8 |
2,266,091 | - | yeiR | b2173 | 0.24 | +0.1 |
2,266,182 | - | yeiR | b2173 | 0.34 | +0.8 |
2,266,182 | - | yeiR | b2173 | 0.34 | +1.8 |
2,266,191 | - | yeiR | b2173 | 0.34 | -0.6 |
2,266,207 | + | yeiR | b2173 | 0.36 | -1.2 |
2,266,223 | - | yeiR | b2173 | 0.38 | +0.3 |
2,266,223 | - | yeiR | b2173 | 0.38 | +0.4 |
2,266,421 | - | yeiR | b2173 | 0.58 | +0.1 |
2,266,421 | - | yeiR | b2173 | 0.58 | +0.7 |
2,266,461 | - | yeiR | b2173 | 0.62 | +0.8 |
2,266,588 | - | yeiR | b2173 | 0.75 | -0.3 |
2,266,651 | + | yeiR | b2173 | 0.81 | -0.2 |
2,266,651 | + | yeiR | b2173 | 0.81 | +1.9 |
2,266,666 | + | yeiR | b2173 | 0.83 | +0.7 |
Or see this region's nucleotide sequence