Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt b2097 and yegT are separated by 256 nucleotides yegT and yegU overlap by 4 nucleotides yegU and yegV overlap by 4 nucleotides
b2097: b2097 - orf, hypothetical protein (VIMSS), at 2,175,534 to 2,176,586
b2097
b2098: yegT - predicted nucleoside transporter (NCBI), at 2,176,843 to 2,178,120
yegT
b2099: yegU - predicted hydrolase (NCBI), at 2,178,117 to 2,179,121
yegU
b2100: yegV - predicted kinase (NCBI), at 2,179,118 to 2,180,083
yegV
Position (kb)
2176
2177
2178
2179 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2175.975 kb on + strand, within b2097 at 2175.975 kb on + strand, within b2097 at 2176.124 kb on + strand, within b2097 at 2176.124 kb on + strand, within b2097 at 2176.175 kb on - strand, within b2097 at 2176.245 kb on + strand, within b2097 at 2176.245 kb on + strand, within b2097 at 2176.264 kb on - strand, within b2097 at 2176.292 kb on + strand, within b2097 at 2176.292 kb on + strand, within b2097 at 2176.345 kb on + strand, within b2097 at 2176.348 kb on - strand, within b2097 at 2176.419 kb on - strand, within b2097 at 2176.488 kb on - strand at 2176.488 kb on - strand at 2176.630 kb on + strand at 2176.630 kb on + strand at 2176.917 kb on - strand at 2176.917 kb on - strand at 2176.973 kb on + strand, within yegT at 2176.974 kb on - strand, within yegT at 2177.161 kb on - strand, within yegT at 2177.165 kb on - strand, within yegT at 2177.287 kb on + strand, within yegT at 2177.301 kb on - strand, within yegT at 2177.359 kb on - strand, within yegT at 2177.359 kb on - strand, within yegT at 2177.451 kb on - strand, within yegT at 2177.521 kb on + strand, within yegT at 2177.521 kb on + strand, within yegT at 2177.531 kb on - strand, within yegT at 2177.790 kb on + strand, within yegT at 2177.830 kb on + strand, within yegT at 2177.862 kb on + strand, within yegT at 2177.873 kb on + strand, within yegT at 2177.966 kb on + strand, within yegT at 2177.974 kb on - strand, within yegT at 2178.144 kb on + strand at 2178.181 kb on + strand at 2178.299 kb on + strand, within yegU at 2178.381 kb on + strand, within yegU at 2178.588 kb on - strand, within yegU at 2178.600 kb on - strand, within yegU at 2178.717 kb on - strand, within yegU at 2178.859 kb on + strand, within yegU at 2178.893 kb on + strand, within yegU at 2178.893 kb on + strand, within yegU at 2178.920 kb on + strand, within yegU at 2179.014 kb on - strand, within yegU
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 2,175,975 + b2097 b2097 0.42 -0.2 2,175,975 + b2097 b2097 0.42 -0.8 2,176,124 + b2097 b2097 0.56 +0.3 2,176,124 + b2097 b2097 0.56 +0.2 2,176,175 - b2097 b2097 0.61 +0.8 2,176,245 + b2097 b2097 0.68 +0.4 2,176,245 + b2097 b2097 0.68 +0.0 2,176,264 - b2097 b2097 0.69 -0.5 2,176,292 + b2097 b2097 0.72 +2.8 2,176,292 + b2097 b2097 0.72 +0.0 2,176,345 + b2097 b2097 0.77 -0.2 2,176,348 - b2097 b2097 0.77 +0.8 2,176,419 - b2097 b2097 0.84 +1.8 2,176,488 - +0.4 2,176,488 - +0.3 2,176,630 + +1.8 2,176,630 + -0.5 2,176,917 - -0.4 2,176,917 - -0.2 2,176,973 + yegT b2098 0.10 -0.2 2,176,974 - yegT b2098 0.10 -0.3 2,177,161 - yegT b2098 0.25 -0.7 2,177,165 - yegT b2098 0.25 -0.0 2,177,287 + yegT b2098 0.35 -1.3 2,177,301 - yegT b2098 0.36 +0.2 2,177,359 - yegT b2098 0.40 -1.2 2,177,359 - yegT b2098 0.40 -1.4 2,177,451 - yegT b2098 0.48 +0.1 2,177,521 + yegT b2098 0.53 +0.1 2,177,521 + yegT b2098 0.53 +0.8 2,177,531 - yegT b2098 0.54 -0.9 2,177,790 + yegT b2098 0.74 -0.3 2,177,830 + yegT b2098 0.77 +0.8 2,177,862 + yegT b2098 0.80 -1.3 2,177,873 + yegT b2098 0.81 -0.2 2,177,966 + yegT b2098 0.88 +0.7 2,177,974 - yegT b2098 0.88 +0.5 2,178,144 + -0.6 2,178,181 + -0.7 2,178,299 + yegU b2099 0.18 +0.1 2,178,381 + yegU b2099 0.26 +0.2 2,178,588 - yegU b2099 0.47 -0.3 2,178,600 - yegU b2099 0.48 +0.8 2,178,717 - yegU b2099 0.60 +1.0 2,178,859 + yegU b2099 0.74 -0.5 2,178,893 + yegU b2099 0.77 +0.1 2,178,893 + yegU b2099 0.77 +0.6 2,178,920 + yegU b2099 0.80 +0.3 2,179,014 - yegU b2099 0.89 +0.2
Or see this region's nucleotide sequence