Strain Fitness in Escherichia coli BW25113 around b0610
Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 7.5 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 641,891 | - | ybdR | b0608 | 0.47 | +0.4 |
| 641,900 | - | ybdR | b0608 | 0.48 | +1.2 |
| 642,079 | + | ybdR | b0608 | 0.62 | -0.1 |
| 642,087 | - | ybdR | b0608 | 0.63 | +0.2 |
| 642,097 | - | ybdR | b0608 | 0.63 | -0.0 |
| 642,173 | + | ybdR | b0608 | 0.70 | +0.6 |
| 642,191 | + | ybdR | b0608 | 0.71 | +0.4 |
| 642,218 | + | ybdR | b0608 | 0.73 | -0.8 |
| 642,317 | - | ybdR | b0608 | 0.81 | -0.5 |
| 642,412 | + | ybdR | b0608 | 0.89 | +0.6 |
| 642,665 | + | +1.0 | |||
| 642,665 | + | -0.5 | |||
| 642,747 | - | +1.4 | |||
| 642,750 | - | -0.3 | |||
| 642,750 | - | -0.3 | |||
| 642,784 | + | +0.4 | |||
| 642,785 | - | -1.3 | |||
| 642,890 | + | rnk | b0610 | 0.27 | -0.8 |
| 642,922 | + | rnk | b0610 | 0.35 | -0.1 |
| 643,290 | - | +0.7 | |||
| 643,339 | + | +0.8 | |||
| 643,347 | - | -0.7 | |||
| 643,530 | + | rna | b0611 | 0.14 | +0.2 |
| 643,726 | - | rna | b0611 | 0.38 | +0.5 |
| 643,817 | + | rna | b0611 | 0.49 | +0.5 |
| 643,950 | - | rna | b0611 | 0.66 | +0.6 |
| 643,967 | + | rna | b0611 | 0.68 | +0.7 |
| 644,107 | + | rna | b0611 | 0.85 | +0.2 |
| 644,115 | - | rna | b0611 | 0.86 | +2.5 |
| 644,115 | - | rna | b0611 | 0.86 | +1.5 |
| 644,115 | - | rna | b0611 | 0.86 | -0.0 |
Or see this region's nucleotide sequence