Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3952

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
4,432,777	+				-0.0
4,432,777	+				+0.2
4,432,972	+				+0.5
4,432,972	+				-0.6
4,432,973	-				-0.7
4,432,973	-				-0.1
4,432,973	-				-0.6
4,432,973	-				+0.0
4,432,981	+				+0.5
4,432,981	+				-0.6
4,432,981	+				+0.5
4,432,981	+				-1.5
4,432,982	-				+0.7
4,432,982	-				-2.5
4,432,982	-				+0.3
4,432,982	-				+0.8
4,433,156	+		PfGW456L13_3951	0.17	+0.2
4,433,268	+		PfGW456L13_3951	0.42	+0.8
4,433,268	+		PfGW456L13_3951	0.42	-0.8
4,433,268	+		PfGW456L13_3951	0.42	-0.2
4,433,268	+		PfGW456L13_3951	0.42	+1.1
4,433,268	+		PfGW456L13_3951	0.42	-1.5
4,433,268	+		PfGW456L13_3951	0.42	-2.3
4,433,268	+		PfGW456L13_3951	0.42	-1.9
4,433,268	+		PfGW456L13_3951	0.42	+1.3
4,433,268	+		PfGW456L13_3951	0.42	+0.8
4,433,268	+		PfGW456L13_3951	0.42	-1.6
4,433,268	+		PfGW456L13_3951	0.42	+2.6
4,433,269	-		PfGW456L13_3951	0.42	-1.4
4,433,269	-		PfGW456L13_3951	0.42	-1.1
4,433,269	-		PfGW456L13_3951	0.42	+0.5
4,433,269	-		PfGW456L13_3951	0.42	-0.2
4,433,269	-		PfGW456L13_3951	0.42	-0.9
4,433,269	-		PfGW456L13_3951	0.42	+0.9
4,433,269	-		PfGW456L13_3951	0.42	+0.9
4,433,269	-		PfGW456L13_3951	0.42	-1.7
4,433,269	-		PfGW456L13_3951	0.42	-1.5
4,433,269	-		PfGW456L13_3951	0.42	+0.5
4,433,269	-		PfGW456L13_3951	0.42	+1.0
4,433,269	-		PfGW456L13_3951	0.42	+1.3
4,433,372	+		PfGW456L13_3951	0.65	+0.7
4,433,373	-				-1.5
4,433,373	-		PfGW456L13_3951	0.65	+2.0
4,433,373	-		PfGW456L13_3951	0.65	+0.6
4,433,383	-		PfGW456L13_3951	0.68	+0.3
4,433,410	+		PfGW456L13_3951	0.74	+0.1
4,433,410	+		PfGW456L13_3951	0.74	-1.5
4,433,411	-		PfGW456L13_3951	0.74	+0.0
4,433,411	-		PfGW456L13_3951	0.74	+0.2
4,433,412	+		PfGW456L13_3951	0.74	+0.4
4,433,412	+		PfGW456L13_3951	0.74	+0.1
4,433,412	+		PfGW456L13_3951	0.74	-0.9
4,433,412	+		PfGW456L13_3951	0.74	-0.1
4,433,412	+		PfGW456L13_3951	0.74	-1.0
4,433,412	+		PfGW456L13_3951	0.74	+0.1
4,433,412	+		PfGW456L13_3951	0.74	+0.1
4,433,412	+		PfGW456L13_3951	0.74	+0.5
4,433,412	+		PfGW456L13_3951	0.74	+2.9
4,433,413	-		PfGW456L13_3951	0.74	+0.8
4,433,413	-		PfGW456L13_3951	0.74	+0.0
4,433,413	-		PfGW456L13_3951	0.74	-0.6
4,433,413	-		PfGW456L13_3951	0.74	-0.0
4,433,413	-		PfGW456L13_3951	0.74	+0.1
4,433,413	-		PfGW456L13_3951	0.74	-0.1
4,433,413	-		PfGW456L13_3951	0.74	-3.6
4,433,413	-				-1.2
4,433,413	-		PfGW456L13_3951	0.74	-0.2
4,433,413	-		PfGW456L13_3951	0.74	-0.9
4,433,413	-		PfGW456L13_3951	0.74	+1.6
4,433,421	+		PfGW456L13_3951	0.76	-1.2
4,433,422	-		PfGW456L13_3951	0.76	+0.4
4,433,422	-		PfGW456L13_3951	0.76	-0.0
4,433,422	-		PfGW456L13_3951	0.76	-0.6
4,433,514	-				-1.5
4,433,518	+				+0.1
4,433,518	+				+1.1
4,433,518	+				-1.9
4,433,518	+				-0.6
4,433,518	+				-1.5
4,433,518	+				+1.1
4,433,518	+				-1.2
4,433,518	+				-1.7
4,433,518	+				-0.2
4,433,518	+				+0.1
4,433,519	-				+1.2
4,433,519	-				+0.8
4,433,519	-				-1.0
4,433,519	-				+1.2
4,433,519	-				+1.1
4,433,519	-				-0.0
4,433,519	-				-0.4
4,433,519	-				+0.9
4,433,519	-				-0.7
4,433,519	-				-1.9
4,433,519	-				+1.8
4,433,519	-				+0.5
4,433,519	-				+0.9
4,433,594	-				-0.8
4,433,600	+				+0.9
4,433,600	+				+0.9
4,433,604	+				-2.2
4,433,605	-				-1.1
4,433,757	+		PfGW456L13_3952	0.10	+0.1
4,433,757	+		PfGW456L13_3952	0.10	+1.2
4,434,093	+		PfGW456L13_3952	0.47	-1.1
4,434,093	+		PfGW456L13_3952	0.47	-0.7
4,434,094	-		PfGW456L13_3952	0.47	-0.2
4,434,127	+		PfGW456L13_3952	0.50	+0.5
4,434,127	+		PfGW456L13_3952	0.50	-0.4
4,434,127	+		PfGW456L13_3952	0.50	-0.3
4,434,127	+		PfGW456L13_3952	0.50	-0.6
4,434,128	-		PfGW456L13_3952	0.50	+0.9
4,434,128	-		PfGW456L13_3952	0.50	+0.1
4,434,128	-		PfGW456L13_3952	0.50	-1.1
4,434,128	-		PfGW456L13_3952	0.50	+1.2
4,434,128	-		PfGW456L13_3952	0.50	+0.7
4,434,128	-		PfGW456L13_3952	0.50	-3.2
4,434,486	+		PfGW456L13_3952	0.89	+1.1
4,434,487	-		PfGW456L13_3952	0.89	+0.6
4,434,487	-		PfGW456L13_3952	0.89	+0.0
4,434,545	-				-1.2
4,434,654	+				-0.9
4,434,661	+				-0.5
4,434,684	+				+1.0
4,434,685	-				-0.3
4,434,685	-				+2.4
4,434,747	+				-1.4
4,434,747	+				-0.7
4,434,747	+				-0.6
4,434,932	+		PfGW456L13_3953	0.25	+0.5
4,434,982	+		PfGW456L13_3953	0.37	+1.1
4,434,983	-		PfGW456L13_3953	0.37	+1.6
4,435,038	+		PfGW456L13_3953	0.50	+4.3
4,435,038	+		PfGW456L13_3953	0.50	+0.1
4,435,038	+		PfGW456L13_3953	0.50	+0.5
4,435,039	-		PfGW456L13_3953	0.50	+1.1
4,435,039	-		PfGW456L13_3953	0.50	+1.5
4,435,167	+		PfGW456L13_3953	0.79	+0.8
4,435,167	+		PfGW456L13_3953	0.79	-0.2
4,435,167	+		PfGW456L13_3953	0.79	-0.7
4,435,168	-		PfGW456L13_3953	0.79	+1.3
4,435,168	-		PfGW456L13_3953	0.79	-0.6
4,435,168	-		PfGW456L13_3953	0.79	+0.3
4,435,278	+				-1.9
4,435,278	+				+1.4
4,435,279	-				+0.6
4,435,299	-				+0.5
4,435,299	-				-0.2
4,435,299	-				-0.1
4,435,353	+				-2.8
4,435,353	+				+0.4
4,435,353	+				+0.2
4,435,353	+				+0.1
4,435,522	+		PfGW456L13_3954	0.26	+0.6
4,435,522	+		PfGW456L13_3954	0.26	+1.2