Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2567

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
2,850,802	+				+0.2
2,850,802	+				+1.4
2,850,802	+				+0.2
2,850,802	+				-0.4
2,850,802	+				-3.6
2,850,802	+				+0.3
2,850,802	+				-1.0
2,850,802	+				+0.8
2,850,802	+				+2.3
2,850,802	+				-0.0
2,850,803	-				+2.3
2,850,803	-				-0.6
2,850,803	-				+1.3
2,850,803	-				+0.7
2,850,803	-				+0.4
2,850,803	-				+0.8
2,850,803	-				+1.2
2,850,803	-				+0.1
2,850,803	-				-2.5
2,850,803	-				+1.3
2,850,803	-				-1.1
2,850,803	-				+1.4
2,850,803	-				+0.2
2,850,803	-				+1.5
2,850,855	+				+2.5
2,850,856	-				+0.6
2,850,856	-				+0.7
2,850,856	-				+2.1
2,850,868	-				-0.6
2,850,868	-				-1.7
2,850,868	-				+0.2
2,850,930	-				-0.3
2,850,982	+				-2.7
2,850,983	-				-0.6
2,850,986	+				-1.3
2,850,986	+				+0.3
2,850,986	+				-1.1
2,850,986	+				-0.1
2,850,986	+				-0.8
2,850,986	+				+1.3
2,850,986	+				-1.2
2,850,986	+				-2.9
2,850,986	+				-0.8
2,850,986	+				+1.6
2,850,987	-				-2.1
2,850,987	-				-1.9
2,850,987	-				-3.3
2,850,987	-				-0.2
2,850,987	-				-0.5
2,850,987	-				-0.8
2,850,988	+				+1.4
2,850,988	+				-3.1
2,850,989	-				-2.1
2,850,992	+				+1.5
2,851,003	+				-2.0
2,851,004	-				-0.2
2,851,012	+				+0.4
2,851,012	+				-2.7
2,851,012	+				+1.7
2,851,013	-				-1.0
2,851,013	-				-0.0
2,851,080	-				-1.1
2,851,198	+				+1.0
2,851,198	+				-1.8
2,851,199	-				+1.2
2,851,200	+				+0.7
2,851,200	+				+0.1
2,851,201	-				-0.1
2,851,201	-				+0.2
2,851,201	-				-2.2
2,851,201	-				+0.2
2,851,240	+				-0.3
2,851,240	+				-0.6
2,851,241	-				-0.6
2,851,292	+				+0.6
2,851,293	-				-2.2
2,851,293	-				+0.6
2,851,326	+				-0.9
2,851,326	+				+0.3
2,851,339	+				-0.5
2,851,339	+				+0.9
2,851,340	-				+2.0
2,851,380	-				+0.2
2,851,380	-				-0.8
2,851,465	+				+0.1
2,851,465	+				+2.3
2,851,465	+				+0.6
2,851,465	+				-0.8
2,851,465	+				+1.2
2,851,500	+				+1.0
2,851,524	+				+1.4
2,851,555	+				+2.0
2,851,646	+				-0.0
2,851,647	-				-0.9
2,851,658	+				-0.4
2,851,689	+				-0.4
2,851,689	+				-1.0
2,851,689	+				+0.0
2,851,689	+				-1.9
2,851,689	+				-0.3
2,851,690	-				-0.3
2,851,690	-				-0.7
2,851,690	-				-1.0
2,851,690	-				+0.2
2,851,690	-				+0.3
2,851,690	-				-1.0
2,851,690	-				-1.5
2,851,690	-				-0.9
2,851,898	+				+1.9
2,851,899	-				+0.7
2,852,026	+		PfGW456L13_2567	0.13	-2.7
2,852,099	+		PfGW456L13_2567	0.16	-0.8
2,852,100	-		PfGW456L13_2567	0.17	-2.5
2,852,100	-		PfGW456L13_2567	0.17	+0.9
2,852,100	-		PfGW456L13_2567	0.17	-1.6
2,852,270	+		PfGW456L13_2567	0.25	-1.8
2,852,270	+		PfGW456L13_2567	0.25	-0.0
2,852,271	-		PfGW456L13_2567	0.25	+0.6
2,852,271	-		PfGW456L13_2567	0.25	+1.3
2,852,271	-		PfGW456L13_2567	0.25	-1.8
2,852,334	-		PfGW456L13_2567	0.28	+0.6
2,852,334	-		PfGW456L13_2567	0.28	-0.6
2,852,334	-		PfGW456L13_2567	0.28	-0.9
2,852,334	-		PfGW456L13_2567	0.28	+0.2
2,852,639	-		PfGW456L13_2567	0.43	-0.6
2,852,639	-		PfGW456L13_2567	0.43	-1.8
2,852,639	-		PfGW456L13_2567	0.43	-1.2
2,852,873	+		PfGW456L13_2567	0.54	-1.8
2,852,873	+		PfGW456L13_2567	0.54	-2.6
2,852,873	+		PfGW456L13_2567	0.54	-0.1
2,852,873	+		PfGW456L13_2567	0.54	-0.1
2,852,873	+		PfGW456L13_2567	0.54	+1.2
2,852,874	-		PfGW456L13_2567	0.54	+1.0
2,852,874	-		PfGW456L13_2567	0.54	+0.3
2,852,874	-		PfGW456L13_2567	0.54	+1.0
2,852,874	-		PfGW456L13_2567	0.54	-0.2
2,853,048	-		PfGW456L13_2567	0.63	-0.5
2,853,048	-		PfGW456L13_2567	0.63	+0.3
2,853,048	-		PfGW456L13_2567	0.63	-0.0
2,853,062	+		PfGW456L13_2567	0.64	+0.8
2,853,063	-		PfGW456L13_2567	0.64	+1.4
2,853,063	-		PfGW456L13_2567	0.64	-2.6
2,853,227	+		PfGW456L13_2567	0.72	-0.8
2,853,227	+		PfGW456L13_2567	0.72	-0.6
2,853,227	+		PfGW456L13_2567	0.72	-0.1
2,853,227	+		PfGW456L13_2567	0.72	+1.4
2,853,228	-		PfGW456L13_2567	0.72	+0.6
2,853,383	-		PfGW456L13_2567	0.79	+0.3
2,853,529	+		PfGW456L13_2567	0.87	-3.6
2,853,566	+		PfGW456L13_2567	0.88	-0.9
2,853,566	+		PfGW456L13_2567	0.88	+0.7
2,853,566	+		PfGW456L13_2567	0.88	+0.8
2,853,567	-		PfGW456L13_2567	0.88	+0.7
2,853,769	+				+0.2
2,853,800	+				-0.0
2,853,801	-				+1.0
2,853,801	-				-1.0
2,853,801	-				+1.2
2,853,922	+				+0.8
2,853,922	+				+0.3
2,853,923	-				-1.5
2,853,923	-				+0.5
2,853,923	-				+0.2
2,853,930	-				+0.6
2,853,930	-				-0.6
2,853,930	-				+0.4
2,853,930	-				+0.1
2,854,182	+		PfGW456L13_2568	0.24	+1.1
2,854,310	+		PfGW456L13_2568	0.38	+0.7
2,854,482	-		PfGW456L13_2568	0.56	-0.5
2,854,560	+				+1.6
2,854,560	+		PfGW456L13_2568	0.65	+0.9
2,854,561	-		PfGW456L13_2568	0.65	-2.5
2,854,561	-		PfGW456L13_2568	0.65	+2.6
2,854,562	+		PfGW456L13_2568	0.65	+0.0
2,854,562	+		PfGW456L13_2568	0.65	-1.9
2,854,562	+		PfGW456L13_2568	0.65	-0.1
2,854,563	-		PfGW456L13_2568	0.65	-3.8
2,854,563	-		PfGW456L13_2568	0.65	-2.8
2,854,563	-		PfGW456L13_2568	0.65	+0.5
2,854,563	-		PfGW456L13_2568	0.65	-2.2
2,854,563	-		PfGW456L13_2568	0.65	-1.5
2,854,563	-		PfGW456L13_2568	0.65	+1.4
2,854,649	+		PfGW456L13_2568	0.74	+0.8
2,854,649	+		PfGW456L13_2568	0.74	+1.7
2,854,649	+		PfGW456L13_2568	0.74	+0.1
2,854,649	+		PfGW456L13_2568	0.74	-0.4
2,854,649	+		PfGW456L13_2568	0.74	+0.2
2,854,649	+		PfGW456L13_2568	0.74	-2.0
2,854,649	+		PfGW456L13_2568	0.74	+1.1
2,854,649	+		PfGW456L13_2568	0.74	+1.3
2,854,649	+		PfGW456L13_2568	0.74	-2.8
2,854,650	-		PfGW456L13_2568	0.75	-0.0
2,854,650	-		PfGW456L13_2568	0.75	-2.8
2,854,650	-		PfGW456L13_2568	0.75	-0.3
2,854,650	-		PfGW456L13_2568	0.75	+1.0
2,854,650	-		PfGW456L13_2568	0.75	+1.7
2,854,650	-		PfGW456L13_2568	0.75	+0.9
2,854,650	-		PfGW456L13_2568	0.75	-1.3
2,854,738	+		PfGW456L13_2568	0.84	+1.1
2,854,738	+		PfGW456L13_2568	0.84	+0.6
2,854,738	+		PfGW456L13_2568	0.84	+0.2
2,854,757	+		PfGW456L13_2568	0.86	+1.2
2,854,757	+		PfGW456L13_2568	0.86	+0.3
2,854,759	+		PfGW456L13_2568	0.86	+0.1
2,854,759	+		PfGW456L13_2568	0.86	-0.8
2,854,760	-		PfGW456L13_2568	0.86	-3.3