Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2553

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
2,820,019	+		PfGW456L13_2551	0.89	-3.4
2,820,019	+		PfGW456L13_2551	0.89	-1.0
2,820,019	+		PfGW456L13_2551	0.89	-3.8
2,820,124	+				-2.8
2,820,124	+				-1.5
2,820,146	+				-0.2
2,820,197	+				+0.1
2,820,197	+				-1.6
2,820,219	+				+1.9
2,820,219	+				+1.0
2,820,220	-				-2.2
2,820,220	-				-2.8
2,820,225	+				-0.1
2,820,236	+				-1.7
2,820,236	+				-0.6
2,820,236	+				-0.6
2,820,236	+				-2.9
2,820,236	+				-0.4
2,820,236	+				+0.6
2,820,236	+				+0.7
2,820,236	+				+0.8
2,820,237	-				-2.7
2,820,237	-				-1.8
2,820,237	-				-2.7
2,820,240	+				+0.3
2,820,240	+				-1.9
2,820,240	+				-1.6
2,820,240	+				-0.1
2,820,240	+				-2.6
2,820,240	+				-1.2
2,820,241	-				-1.5
2,820,241	-				-2.8
2,820,277	+				-2.2
2,820,277	+				-2.7
2,820,278	-				-1.0
2,820,370	+				-2.3
2,820,371	-				-1.0
2,820,371	-				-3.3
2,820,371	-				-1.0
2,820,424	+		PfGW456L13_2552	0.17	-2.3
2,820,424	+		PfGW456L13_2552	0.17	-3.3
2,820,424	+		PfGW456L13_2552	0.17	-3.2
2,820,425	-		PfGW456L13_2552	0.17	-1.7
2,820,425	-		PfGW456L13_2552	0.17	-2.6
2,820,425	-		PfGW456L13_2552	0.17	-1.6
2,820,425	-		PfGW456L13_2552	0.17	-2.6
2,820,425	-		PfGW456L13_2552	0.17	-3.4
2,820,425	-		PfGW456L13_2552	0.17	-2.3
2,820,425	-		PfGW456L13_2552	0.17	-1.8
2,820,496	+		PfGW456L13_2552	0.30	-2.5
2,820,496	+		PfGW456L13_2552	0.30	-0.2
2,820,496	+		PfGW456L13_2552	0.30	-3.4
2,820,496	+		PfGW456L13_2552	0.30	-2.7
2,820,496	+		PfGW456L13_2552	0.30	-1.1
2,820,496	+		PfGW456L13_2552	0.30	-2.2
2,820,496	+		PfGW456L13_2552	0.30	-1.3
2,820,496	+		PfGW456L13_2552	0.30	-0.6
2,820,497	-		PfGW456L13_2552	0.30	-2.6
2,820,497	-		PfGW456L13_2552	0.30	-1.9
2,820,497	-		PfGW456L13_2552	0.30	-1.6
2,820,497	-		PfGW456L13_2552	0.30	-3.3
2,820,497	-		PfGW456L13_2552	0.30	-2.2
2,820,497	-		PfGW456L13_2552	0.30	-2.1
2,820,498	+		PfGW456L13_2552	0.30	-1.3
2,820,542	-		PfGW456L13_2552	0.38	-3.0
2,820,857	-				-1.3
2,820,895	+				-0.1
2,820,896	-				+1.0
2,820,900	+				-1.2
2,820,900	+				-0.1
2,820,900	+				-1.6
2,820,914	+				+0.5
2,820,914	+				-1.5
2,820,915	-				-0.0
2,820,915	-				-0.8
2,820,915	-				-2.7
2,820,964	+				-0.4
2,821,052	+				-1.6
2,821,052	+				-0.4
2,821,052	+				-1.3
2,821,053	-				-2.8
2,821,053	-				-0.4
2,821,053	-				-1.3
2,821,053	-				-1.0
2,821,053	-				-0.3
2,821,086	+				-2.2
2,821,086	+				-3.1
2,821,086	+				-0.6
2,821,198	+		PfGW456L13_2553	0.15	-0.6
2,821,241	+		PfGW456L13_2553	0.18	-1.8
2,821,241	+		PfGW456L13_2553	0.18	-0.0
2,821,242	-		PfGW456L13_2553	0.18	-1.8
2,821,242	-		PfGW456L13_2553	0.18	-3.1
2,821,242	-		PfGW456L13_2553	0.18	-3.4
2,821,289	+		PfGW456L13_2553	0.22	-3.4
2,821,289	+		PfGW456L13_2553	0.22	-2.8
2,821,290	-		PfGW456L13_2553	0.22	-1.0
2,821,298	+		PfGW456L13_2553	0.22	-2.6
2,821,453	+		PfGW456L13_2553	0.35	+0.4
2,821,453	+		PfGW456L13_2553	0.35	-0.3
2,821,472	+		PfGW456L13_2553	0.36	-0.1
2,821,559	+		PfGW456L13_2553	0.43	-0.8
2,821,559	+		PfGW456L13_2553	0.43	-3.4
2,821,560	-		PfGW456L13_2553	0.43	-2.2
2,821,739	-		PfGW456L13_2553	0.57	-3.3
2,822,021	+		PfGW456L13_2553	0.79	-2.3
2,822,021	+		PfGW456L13_2553	0.79	-0.9
2,822,107	+		PfGW456L13_2553	0.85	-3.9
2,822,148	+		PfGW456L13_2553	0.89	-1.9
2,822,148	+		PfGW456L13_2553	0.89	-0.2
2,822,148	+		PfGW456L13_2553	0.89	-2.0
2,822,161	+		PfGW456L13_2553	0.90	-3.9
2,822,161	+		PfGW456L13_2553	0.90	-1.7
2,822,161	+		PfGW456L13_2553	0.90	+0.1
2,822,161	+		PfGW456L13_2553	0.90	-1.9
2,822,161	+		PfGW456L13_2553	0.90	-0.3
2,822,161	+		PfGW456L13_2553	0.90	-1.2
2,822,161	+		PfGW456L13_2553	0.90	-2.0
2,822,161	+		PfGW456L13_2553	0.90	-2.9
2,822,165	+				-1.3
2,822,165	+				-3.3
2,822,165	+				-0.4
2,822,165	+				-1.9
2,822,165	+				-0.8
2,822,166	-				-1.0
2,822,166	-				-3.2
2,822,166	-				-2.2
2,822,166	-				-1.2
2,822,166	-				-2.8
2,822,166	-				+1.6
2,822,199	+				-2.2
2,822,200	-				-1.3
2,822,200	-				-1.8
2,822,220	+				+0.3
2,822,221	-				-2.0
2,822,221	-				+1.0
2,822,243	+				-1.1
2,822,243	+				+0.6
2,822,243	+				-1.5
2,822,243	+				+0.6
2,822,243	+				-1.1
2,822,243	+				-2.0
2,822,243	+				-0.7
2,822,243	+				-0.1
2,822,243	+				-2.4
2,822,243	+				-0.8
2,822,243	+				-0.0
2,822,243	+				-0.7
2,822,243	+				+0.4
2,822,243	+				+0.8
2,822,243	+				+0.5
2,822,243	+				+0.1
2,822,243	+				-1.2
2,822,243	+				-2.3
2,822,243	+				-0.8
2,822,243	+				-0.4
2,822,244	-				-0.1
2,822,244	-				-3.1
2,822,244	-				-1.5
2,822,244	-				+1.0
2,822,244	-				-1.6
2,822,244	-				-0.6
2,822,244	-				-2.2
2,822,244	-				-0.0
2,822,244	-				-0.8
2,822,244	-				+1.7
2,822,244	-				-0.4
2,822,245	+				-0.9
2,822,245	+				+0.6
2,822,245	+				-1.9
2,822,245	+				+1.9
2,822,245	+				-4.0
2,822,245	+				-0.1
2,822,245	+				+0.6
2,822,245	+				-0.7
2,822,246	-				-2.0
2,822,249	+				+1.0
2,822,249	+				+0.3
2,822,249	+				-1.2
2,822,249	+				-0.0
2,822,250	-				-1.3
2,822,250	-				+0.1
2,822,291	+				+1.7
2,822,291	+				+0.2
2,822,291	+				+0.4
2,822,340	-				-1.8
2,822,423	+				+0.7
2,822,424	-				-2.0
2,822,452	-				-0.2
2,822,498	+				+0.6
2,822,498	+				+1.2
2,822,498	+				-0.0
2,822,498	+				+1.6
2,822,498	+				+1.0
2,822,498	+				-0.7
2,822,498	+				-3.2
2,822,499	-				+1.0
2,822,499	-				-2.5
2,822,499	-				-3.1
2,822,520	+				+0.7
2,822,532	-				-0.8
2,822,952	+		PfGW456L13_2554	0.17	-1.5
2,822,952	+		PfGW456L13_2554	0.17	-0.3
2,822,952	+		PfGW456L13_2554	0.17	+1.7
2,822,952	+		PfGW456L13_2554	0.17	-1.9
2,822,953	-		PfGW456L13_2554	0.17	-1.0
2,823,214	-		PfGW456L13_2554	0.28	-3.5
2,823,216	+		PfGW456L13_2554	0.28	-0.7