Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3350

Experiment: m.b. benzoic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. benzoic 0.4 mg/ml
3,953,179	-				+0.4
3,953,179	-				-0.6
3,953,189	+				+0.6
3,953,369	+		Echvi_3349	0.19	-1.3
3,953,370	-		Echvi_3349	0.19	-0.1
3,953,386	+		Echvi_3349	0.20	-1.3
3,953,391	+		Echvi_3349	0.21	+0.7
3,953,435	+		Echvi_3349	0.26	-0.1
3,953,436	-		Echvi_3349	0.26	+0.0
3,953,454	+		Echvi_3349	0.28	-0.2
3,953,454	+		Echvi_3349	0.28	+0.2
3,953,454	+		Echvi_3349	0.28	-0.1
3,953,454	+		Echvi_3349	0.28	+0.3
3,953,455	-		Echvi_3349	0.28	+0.9
3,953,455	-		Echvi_3349	0.28	-1.7
3,953,455	-		Echvi_3349	0.28	-0.7
3,953,455	-		Echvi_3349	0.28	+1.5
3,953,455	-		Echvi_3349	0.28	-1.2
3,953,456	+		Echvi_3349	0.28	+0.0
3,953,456	+		Echvi_3349	0.28	+1.5
3,953,456	+		Echvi_3349	0.28	+0.1
3,953,456	+		Echvi_3349	0.28	+1.5
3,953,456	+		Echvi_3349	0.28	-0.6
3,953,456	+		Echvi_3349	0.28	-1.7
3,953,456	+		Echvi_3349	0.28	-0.4
3,953,456	+		Echvi_3349	0.28	-2.0
3,953,457	-		Echvi_3349	0.28	+1.5
3,953,457	-		Echvi_3349	0.28	+0.3
3,953,457	-		Echvi_3349	0.28	-0.5
3,953,495	+		Echvi_3349	0.33	+0.5
3,953,495	+		Echvi_3349	0.33	-0.9
3,953,498	-		Echvi_3349	0.33	+0.6
3,953,516	+		Echvi_3349	0.35	+0.7
3,953,531	-		Echvi_3349	0.37	+0.6
3,953,662	-		Echvi_3349	0.52	+0.9
3,953,694	+		Echvi_3349	0.55	+0.6
3,953,716	+		Echvi_3349	0.58	-0.5
3,953,726	-		Echvi_3349	0.59	-0.5
3,953,820	+		Echvi_3349	0.69	-0.7
3,953,821	-		Echvi_3349	0.69	+1.3
3,953,821	-		Echvi_3349	0.69	+0.9
3,953,821	-		Echvi_3349	0.69	-0.5
3,953,860	+		Echvi_3349	0.74	+0.9
3,953,865	+		Echvi_3349	0.74	-0.6
3,953,872	+		Echvi_3349	0.75	+0.3
3,953,873	-		Echvi_3349	0.75	-0.5
3,953,917	+		Echvi_3349	0.80	+1.2
3,953,917	+		Echvi_3349	0.80	-0.9
3,953,920	+		Echvi_3349	0.81	-1.1
3,953,921	-		Echvi_3349	0.81	-0.8
3,953,990	-		Echvi_3349	0.89	+0.4
3,954,012	+				-0.2
3,954,013	-				+1.5
3,954,057	-				+0.2
3,954,071	+				-0.8
3,954,078	+				-0.5
3,954,078	+				+0.9
3,954,078	+				-0.9
3,954,079	-				+0.3
3,954,079	-				+0.3
3,954,086	-				+1.5
3,954,095	-				+1.2
3,954,147	+				-0.1
3,954,148	-				-1.7
3,954,169	-				+2.1
3,954,228	-				-0.2
3,954,228	-				-0.8
3,954,233	-				-0.5
3,954,285	-		Echvi_3350	0.13	-1.4
3,954,320	-		Echvi_3350	0.15	-2.2
3,954,341	-		Echvi_3350	0.17	-0.5
3,954,341	-		Echvi_3350	0.17	+0.1
3,954,344	-		Echvi_3350	0.18	+0.2
3,954,448	-		Echvi_3350	0.26	-0.5
3,954,448	-		Echvi_3350	0.26	+0.3
3,954,472	-		Echvi_3350	0.28	-2.3
3,954,472	-		Echvi_3350	0.28	-0.7
3,954,472	-		Echvi_3350	0.28	-0.4
3,954,531	-		Echvi_3350	0.33	+1.3
3,954,630	+		Echvi_3350	0.42	-0.3
3,954,666	+		Echvi_3350	0.45	+0.5
3,954,667	-		Echvi_3350	0.45	+0.2
3,954,768	-		Echvi_3350	0.53	-1.3
3,954,912	+		Echvi_3350	0.66	-0.2
3,954,912	+		Echvi_3350	0.66	+0.3
3,954,912	+		Echvi_3350	0.66	+0.1
3,954,912	+		Echvi_3350	0.66	-0.5
3,954,913	-		Echvi_3350	0.66	-0.2
3,954,954	+		Echvi_3350	0.69	+0.5
3,955,121	-		Echvi_3350	0.83	-1.2
3,955,308	+				-0.2
3,955,309	-				+0.4
3,955,312	+				+0.4
3,955,312	+				-1.1
3,955,312	+				+0.4
3,955,313	-				-2.1
3,955,313	-				-0.2
3,955,319	-				+1.2
3,955,324	+				+0.3
3,955,324	+				-0.8
3,955,325	-				+0.2
3,955,399	-				-0.4
3,955,458	+				+0.8
3,955,458	+				-1.3
3,955,459	-				-1.0
3,955,467	+				-0.1
3,955,467	+				-0.2
3,955,468	-				-0.4
3,955,496	-				-2.1
3,955,509	-				-0.4
3,955,516	+				-0.9
3,955,516	+				+0.0
3,955,548	+				+0.5
3,955,549	-				-1.1
3,955,556	+				-1.6
3,955,556	+				-1.3
3,955,581	-		Echvi_3351	0.11	-0.8
3,955,581	-		Echvi_3351	0.11	-0.2
3,955,843	-		Echvi_3351	0.27	-0.0
3,955,895	-		Echvi_3351	0.30	+0.8
3,956,010	-		Echvi_3351	0.37	-0.7
3,956,023	-		Echvi_3351	0.38	-1.7
3,956,023	-		Echvi_3351	0.38	+1.1
3,956,023	-		Echvi_3351	0.38	+0.5
3,956,117	-		Echvi_3351	0.44	+0.7
3,956,117	-		Echvi_3351	0.44	+1.5
3,956,122	+		Echvi_3351	0.44	+0.5
3,956,311	+		Echvi_3351	0.56	+1.7
3,956,317	+		Echvi_3351	0.56	+0.5
3,956,318	-		Echvi_3351	0.56	-0.1
3,956,318	-		Echvi_3351	0.56	+1.2