Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1888

Experiment: m.b. benzoic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. benzoic 0.4 mg/ml
2,214,177	-				+0.7
2,214,179	+				+0.7
2,214,180	-				+0.7
2,214,180	-				-0.3
2,214,227	-				+1.7
2,214,254	+				+0.0
2,214,261	+				+0.7
2,214,262	-				+1.4
2,214,277	+				+0.0
2,214,344	+		Echvi_1887	0.13	+0.3
2,214,344	+		Echvi_1887	0.13	-0.3
2,214,376	-		Echvi_1887	0.17	+0.7
2,214,423	+		Echvi_1887	0.23	-0.3
2,214,424	-		Echvi_1887	0.23	+0.7
2,214,576	+		Echvi_1887	0.42	+0.1
2,214,602	-		Echvi_1887	0.45	+0.9
2,214,667	+		Echvi_1887	0.54	+0.1
2,214,686	+		Echvi_1887	0.56	+0.5
2,214,699	+		Echvi_1887	0.58	+0.5
2,214,700	-		Echvi_1887	0.58	-1.7
2,214,742	+		Echvi_1887	0.63	+0.7
2,214,742	+		Echvi_1887	0.63	+0.2
2,214,742	+		Echvi_1887	0.63	-0.8
2,214,743	-		Echvi_1887	0.63	-0.4
2,214,744	+		Echvi_1887	0.63	+0.3
2,214,745	-		Echvi_1887	0.63	-0.3
2,214,745	-		Echvi_1887	0.63	-0.3
2,214,789	-		Echvi_1887	0.69	-0.2
2,214,792	-		Echvi_1887	0.69	-0.1
2,214,815	+		Echvi_1887	0.72	-0.4
2,214,815	+		Echvi_1887	0.72	-0.6
2,214,816	-		Echvi_1887	0.72	-0.3
2,214,816	-		Echvi_1887	0.72	-1.2
2,214,816	-		Echvi_1887	0.72	+1.7
2,214,816	-		Echvi_1887	0.72	-1.2
2,214,816	-		Echvi_1887	0.72	-0.2
2,214,816	-		Echvi_1887	0.72	-0.6
2,214,820	+		Echvi_1887	0.73	-0.5
2,214,822	+		Echvi_1887	0.73	-0.3
2,215,043	-				+0.3
2,215,110	+				+0.5
2,215,150	+				+0.1
2,215,151	-				-3.2
2,215,156	-				-0.2
2,215,196	+				+0.1
2,215,196	+				+0.9
2,215,197	-				-0.3
2,215,197	-				+0.5
2,215,197	-				+0.0
2,215,211	-				+0.2
2,215,232	+				+0.2
2,215,233	-				+0.2
2,215,233	-				-2.1
2,215,233	-				-0.2
2,215,339	+				-0.1
2,215,380	+		Echvi_1888	0.11	+0.3
2,215,380	+		Echvi_1888	0.11	+0.8
2,215,380	+		Echvi_1888	0.11	+0.1
2,215,381	-		Echvi_1888	0.11	+0.2
2,215,381	-		Echvi_1888	0.11	-0.4
2,215,381	-		Echvi_1888	0.11	+1.3
2,215,392	+		Echvi_1888	0.11	+0.6
2,215,412	+		Echvi_1888	0.12	+1.1
2,215,449	-		Echvi_1888	0.14	-1.1
2,215,449	-		Echvi_1888	0.14	+1.1
2,215,449	-		Echvi_1888	0.14	+0.1
2,215,586	+		Echvi_1888	0.21	+1.7
2,215,586	+		Echvi_1888	0.21	+1.2
2,215,600	+		Echvi_1888	0.21	+0.2
2,215,600	+		Echvi_1888	0.21	-0.3
2,215,600	+		Echvi_1888	0.21	-0.0
2,215,623	+		Echvi_1888	0.22	-0.4
2,215,624	-		Echvi_1888	0.22	+0.2
2,215,624	-		Echvi_1888	0.22	+0.2
2,215,630	+		Echvi_1888	0.23	+0.8
2,215,630	+		Echvi_1888	0.23	+0.7
2,215,631	-		Echvi_1888	0.23	+0.6
2,215,631	-		Echvi_1888	0.23	+0.7
2,215,631	-		Echvi_1888	0.23	+0.2
2,215,632	+		Echvi_1888	0.23	+0.5
2,215,632	+		Echvi_1888	0.23	-0.0
2,215,632	+		Echvi_1888	0.23	-0.5
2,215,632	+		Echvi_1888	0.23	-0.8
2,215,632	+		Echvi_1888	0.23	+0.2
2,215,632	+		Echvi_1888	0.23	-0.6
2,215,632	+		Echvi_1888	0.23	+1.0
2,215,632	+		Echvi_1888	0.23	+0.6
2,215,633	-		Echvi_1888	0.23	+0.1
2,215,633	-		Echvi_1888	0.23	+0.2
2,215,749	+		Echvi_1888	0.28	+0.5
2,215,749	+		Echvi_1888	0.28	+1.2
2,215,749	+		Echvi_1888	0.28	+0.5
2,215,750	-		Echvi_1888	0.28	+0.3
2,215,792	-		Echvi_1888	0.30	-0.1
2,215,915	-		Echvi_1888	0.36	+2.3
2,215,994	+		Echvi_1888	0.40	-0.6
2,216,076	-		Echvi_1888	0.44	+0.2
2,216,077	+		Echvi_1888	0.44	-0.7
2,216,114	+		Echvi_1888	0.45	-0.0
2,216,115	-		Echvi_1888	0.45	+0.2
2,216,150	+		Echvi_1888	0.47	+0.7
2,216,150	+		Echvi_1888	0.47	+0.2
2,216,151	-		Echvi_1888	0.47	+3.7
2,216,219	+		Echvi_1888	0.50	-0.1
2,216,219	+		Echvi_1888	0.50	+0.5
2,216,220	-		Echvi_1888	0.50	-1.4
2,216,220	-		Echvi_1888	0.50	+0.1
2,216,220	-		Echvi_1888	0.50	-0.9
2,216,220	-		Echvi_1888	0.50	+0.2
2,216,220	-		Echvi_1888	0.50	-0.8
2,216,274	+		Echvi_1888	0.53	+0.6
2,216,275	-		Echvi_1888	0.53	-0.2
2,216,308	-		Echvi_1888	0.54	-0.3
2,216,396	+		Echvi_1888	0.59	+0.5
2,216,396	+		Echvi_1888	0.59	-0.9
2,216,396	+		Echvi_1888	0.59	-0.2
2,216,396	+		Echvi_1888	0.59	+0.5
2,216,396	+		Echvi_1888	0.59	+0.9
2,216,396	+		Echvi_1888	0.59	+1.2
2,216,397	-		Echvi_1888	0.59	+0.7
2,216,397	-		Echvi_1888	0.59	+0.9
2,216,397	-		Echvi_1888	0.59	+0.2
2,216,397	-		Echvi_1888	0.59	+0.0
2,216,397	-		Echvi_1888	0.59	+0.6
2,216,397	-		Echvi_1888	0.59	+0.5
2,216,397	-		Echvi_1888	0.59	+0.8
2,216,397	-		Echvi_1888	0.59	+0.5
2,216,432	+		Echvi_1888	0.60	-0.5
2,216,432	+		Echvi_1888	0.60	-0.0
2,216,446	+		Echvi_1888	0.61	+0.6
2,216,475	+		Echvi_1888	0.62	+0.4
2,216,475	+		Echvi_1888	0.62	+0.3
2,216,511	+		Echvi_1888	0.64	+0.2
2,216,522	+		Echvi_1888	0.65	+1.2
2,216,523	-		Echvi_1888	0.65	-0.6
2,216,600	+		Echvi_1888	0.68	-0.3
2,216,601	-		Echvi_1888	0.68	-0.1
2,216,601	-		Echvi_1888	0.68	-0.0
2,216,716	+		Echvi_1888	0.74	-1.5
2,216,720	-		Echvi_1888	0.74	-0.0
2,216,729	-		Echvi_1888	0.74	+1.2
2,216,844	+		Echvi_1888	0.80	-0.4
2,216,859	+		Echvi_1888	0.80	-0.4
2,216,897	+		Echvi_1888	0.82	+0.1
2,216,898	-		Echvi_1888	0.82	+1.0
2,216,898	-		Echvi_1888	0.82	+0.1
2,216,898	-		Echvi_1888	0.82	+0.1
2,216,905	+		Echvi_1888	0.83	-0.3
2,217,016	+		Echvi_1888	0.88	+0.3
2,217,016	+		Echvi_1888	0.88	+0.4
2,217,016	+		Echvi_1888	0.88	-0.2
2,217,026	-		Echvi_1888	0.88	+1.6
2,217,026	-		Echvi_1888	0.88	+0.7
2,217,026	-		Echvi_1888	0.88	+0.7
2,217,240	-				-1.8
2,217,261	+				+0.5
2,217,262	-				-1.1
2,217,279	+				+0.6
2,217,362	+				+0.4
2,217,362	+				-0.3
2,217,363	-				+0.7
2,217,376	-				+0.3
2,217,390	+				-1.4
2,217,390	+				-0.4
2,217,390	+				-2.3
2,217,391	-				+0.1
2,217,391	-				+1.2
2,217,394	-				-0.3
2,217,469	+				+0.7
2,217,469	+				+0.8
2,217,480	+				+0.4
2,217,500	+				-1.3