Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1565 and Echvi_1566 are separated by 57 nucleotides Echvi_1566 and Echvi_1567 are separated by 39 nucleotides Echvi_1567 and Echvi_1568 overlap by 4 nucleotides
Echvi_1565: Echvi_1565 - Trk-type K+ transport systems, membrane components, at 1,798,470 to 1,800,251
_1565
Echvi_1566: Echvi_1566 - K+ transport systems, NAD-binding component, at 1,800,309 to 1,801,001
_1566
Echvi_1567: Echvi_1567 - Uncharacterized conserved protein, at 1,801,041 to 1,801,628
_1567
Echvi_1568: Echvi_1568 - Uncharacterized conserved protein containing a ferredoxin-like domain, at 1,801,625 to 1,802,998
_1568
Position (kb)
1801
1802 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1800.242 kb on + strand at 1800.269 kb on + strand at 1800.269 kb on + strand at 1800.285 kb on - strand at 1800.295 kb on + strand at 1800.308 kb on + strand at 1800.317 kb on + strand at 1800.318 kb on - strand at 1800.318 kb on - strand at 1800.348 kb on + strand at 1800.348 kb on + strand at 1800.348 kb on + strand at 1800.349 kb on - strand at 1800.349 kb on - strand at 1800.411 kb on - strand, within Echvi_1566 at 1800.453 kb on - strand, within Echvi_1566 at 1800.511 kb on + strand, within Echvi_1566 at 1800.512 kb on - strand, within Echvi_1566 at 1800.545 kb on + strand, within Echvi_1566 at 1800.545 kb on + strand, within Echvi_1566 at 1800.545 kb on + strand, within Echvi_1566 at 1800.546 kb on - strand, within Echvi_1566 at 1800.546 kb on - strand, within Echvi_1566 at 1800.546 kb on - strand, within Echvi_1566 at 1800.612 kb on - strand, within Echvi_1566 at 1800.629 kb on + strand, within Echvi_1566 at 1800.741 kb on + strand, within Echvi_1566 at 1800.742 kb on - strand, within Echvi_1566 at 1800.746 kb on + strand, within Echvi_1566 at 1800.747 kb on - strand, within Echvi_1566 at 1800.747 kb on - strand, within Echvi_1566 at 1800.747 kb on - strand, within Echvi_1566 at 1800.747 kb on - strand, within Echvi_1566 at 1800.909 kb on - strand, within Echvi_1566 at 1800.917 kb on + strand, within Echvi_1566 at 1800.917 kb on + strand, within Echvi_1566 at 1801.147 kb on - strand, within Echvi_1567 at 1801.147 kb on - strand, within Echvi_1567 at 1801.315 kb on - strand, within Echvi_1567 at 1801.472 kb on + strand, within Echvi_1567 at 1801.473 kb on - strand, within Echvi_1567 at 1801.485 kb on + strand, within Echvi_1567 at 1801.486 kb on - strand, within Echvi_1567 at 1801.605 kb on + strand at 1801.605 kb on + strand at 1801.645 kb on + strand at 1801.720 kb on - strand at 1801.720 kb on - strand at 1801.780 kb on - strand, within Echvi_1568 at 1801.958 kb on - strand, within Echvi_1568 at 1801.958 kb on - strand, within Echvi_1568 at 1801.963 kb on - strand, within Echvi_1568 at 1801.963 kb on - strand, within Echvi_1568 at 1802.019 kb on + strand, within Echvi_1568 at 1802.019 kb on + strand, within Echvi_1568 at 1802.020 kb on - strand, within Echvi_1568 at 1802.020 kb on - strand, within Echvi_1568 at 1802.020 kb on - strand, within Echvi_1568 at 1802.020 kb on - strand, within Echvi_1568 at 1802.020 kb on - strand, within Echvi_1568 at 1802.025 kb on + strand, within Echvi_1568 at 1802.026 kb on - strand, within Echvi_1568 at 1802.044 kb on + strand, within Echvi_1568 at 1802.045 kb on - strand, within Echvi_1568 at 1802.157 kb on + strand, within Echvi_1568 at 1802.157 kb on + strand, within Echvi_1568 at 1802.158 kb on - strand, within Echvi_1568 at 1802.199 kb on + strand, within Echvi_1568 at 1802.199 kb on + strand, within Echvi_1568 at 1802.199 kb on + strand, within Echvi_1568 at 1802.200 kb on - strand, within Echvi_1568 at 1802.237 kb on + strand, within Echvi_1568 at 1802.243 kb on + strand, within Echvi_1568 at 1802.244 kb on - strand, within Echvi_1568 at 1802.250 kb on - strand, within Echvi_1568 at 1802.250 kb on - strand, within Echvi_1568 at 1802.294 kb on - strand, within Echvi_1568 at 1802.294 kb on - strand, within Echvi_1568 at 1802.306 kb on + strand, within Echvi_1568 at 1802.306 kb on + strand, within Echvi_1568 at 1802.306 kb on + strand, within Echvi_1568 at 1802.307 kb on - strand, within Echvi_1568 at 1802.429 kb on - strand, within Echvi_1568 at 1802.537 kb on + strand, within Echvi_1568 at 1802.538 kb on - strand, within Echvi_1568 at 1802.538 kb on - strand, within Echvi_1568
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 1,800,242 + -0.3 1,800,269 + +0.5 1,800,269 + +0.0 1,800,285 - +0.6 1,800,295 + -2.2 1,800,308 + +0.1 1,800,317 + -0.1 1,800,318 - +1.6 1,800,318 - +3.4 1,800,348 + -1.9 1,800,348 + +0.1 1,800,348 + -0.3 1,800,349 - +0.7 1,800,349 - -0.2 1,800,411 - Echvi_1566 0.15 +0.1 1,800,453 - Echvi_1566 0.21 -0.1 1,800,511 + Echvi_1566 0.29 +0.2 1,800,512 - Echvi_1566 0.29 -0.3 1,800,545 + Echvi_1566 0.34 +0.1 1,800,545 + Echvi_1566 0.34 +0.1 1,800,545 + Echvi_1566 0.34 +0.0 1,800,546 - Echvi_1566 0.34 -0.9 1,800,546 - Echvi_1566 0.34 +0.5 1,800,546 - Echvi_1566 0.34 -0.4 1,800,612 - Echvi_1566 0.44 -0.4 1,800,629 + Echvi_1566 0.46 +0.1 1,800,741 + Echvi_1566 0.62 -0.5 1,800,742 - Echvi_1566 0.62 +0.3 1,800,746 + Echvi_1566 0.63 -0.2 1,800,747 - Echvi_1566 0.63 -1.0 1,800,747 - Echvi_1566 0.63 +1.1 1,800,747 - Echvi_1566 0.63 -0.3 1,800,747 - Echvi_1566 0.63 -0.8 1,800,909 - Echvi_1566 0.87 -0.2 1,800,917 + Echvi_1566 0.88 +0.8 1,800,917 + Echvi_1566 0.88 +0.2 1,801,147 - Echvi_1567 0.18 +0.2 1,801,147 - Echvi_1567 0.18 -1.0 1,801,315 - Echvi_1567 0.47 -0.5 1,801,472 + Echvi_1567 0.73 -1.5 1,801,473 - Echvi_1567 0.73 -1.3 1,801,485 + Echvi_1567 0.76 -1.9 1,801,486 - Echvi_1567 0.76 +0.1 1,801,605 + -1.8 1,801,605 + +0.4 1,801,645 + +0.2 1,801,720 - +1.5 1,801,720 - -0.6 1,801,780 - Echvi_1568 0.11 +2.6 1,801,958 - Echvi_1568 0.24 +0.6 1,801,958 - Echvi_1568 0.24 -0.4 1,801,963 - Echvi_1568 0.25 +0.4 1,801,963 - Echvi_1568 0.25 +0.2 1,802,019 + Echvi_1568 0.29 +1.0 1,802,019 + Echvi_1568 0.29 -0.2 1,802,020 - Echvi_1568 0.29 -1.2 1,802,020 - Echvi_1568 0.29 -0.2 1,802,020 - Echvi_1568 0.29 -0.6 1,802,020 - Echvi_1568 0.29 -0.5 1,802,020 - Echvi_1568 0.29 +1.2 1,802,025 + Echvi_1568 0.29 -0.2 1,802,026 - Echvi_1568 0.29 -0.8 1,802,044 + Echvi_1568 0.30 -0.5 1,802,045 - Echvi_1568 0.31 +0.4 1,802,157 + Echvi_1568 0.39 -1.3 1,802,157 + Echvi_1568 0.39 -0.9 1,802,158 - Echvi_1568 0.39 -0.2 1,802,199 + Echvi_1568 0.42 -2.0 1,802,199 + Echvi_1568 0.42 +1.1 1,802,199 + Echvi_1568 0.42 -0.7 1,802,200 - Echvi_1568 0.42 +1.8 1,802,237 + Echvi_1568 0.45 +1.6 1,802,243 + Echvi_1568 0.45 -0.5 1,802,244 - Echvi_1568 0.45 -0.7 1,802,250 - Echvi_1568 0.45 +2.0 1,802,250 - Echvi_1568 0.45 +0.6 1,802,294 - Echvi_1568 0.49 -0.2 1,802,294 - Echvi_1568 0.49 -0.2 1,802,306 + Echvi_1568 0.50 -0.4 1,802,306 + Echvi_1568 0.50 +0.7 1,802,306 + Echvi_1568 0.50 +0.2 1,802,307 - Echvi_1568 0.50 +1.2 1,802,429 - Echvi_1568 0.59 +0.7 1,802,537 + Echvi_1568 0.66 -2.5 1,802,538 - Echvi_1568 0.66 -0.2 1,802,538 - Echvi_1568 0.66 -0.2
Or see this region's nucleotide sequence