Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1224

Experiment: m.b. benzoic 0.4 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. benzoic 0.4 mg/ml
1,402,873	-				+0.5
1,402,896	+				+1.5
1,402,902	+				+1.0
1,402,910	-				+0.9
1,402,954	-				+0.6
1,402,959	+				-1.3
1,403,019	+				+0.3
1,403,019	+				-0.1
1,403,019	+				+0.0
1,403,019	+				-0.8
1,403,020	-				+0.9
1,403,020	-				-0.7
1,403,020	-				+0.4
1,403,021	+				+0.0
1,403,022	-				+0.7
1,403,042	+				+0.3
1,403,063	-				-0.0
1,403,063	-				+0.9
1,403,213	+				+0.8
1,403,286	+		Echvi_1223	0.20	-0.8
1,403,287	-		Echvi_1223	0.20	+1.2
1,403,374	+		Echvi_1223	0.34	+1.2
1,403,374	+		Echvi_1223	0.34	+0.4
1,403,403	+		Echvi_1223	0.39	-0.7
1,403,404	-		Echvi_1223	0.39	+1.3
1,403,404	-		Echvi_1223	0.39	+0.6
1,403,538	+		Echvi_1223	0.62	+0.1
1,403,571	+		Echvi_1223	0.67	+0.9
1,403,571	+		Echvi_1223	0.67	-0.1
1,403,572	-		Echvi_1223	0.67	+0.3
1,403,572	-		Echvi_1223	0.67	+0.6
1,403,573	+		Echvi_1223	0.67	+0.4
1,403,573	+		Echvi_1223	0.67	+1.0
1,403,573	+		Echvi_1223	0.67	-0.3
1,403,633	+		Echvi_1223	0.77	-1.8
1,403,634	-		Echvi_1223	0.77	+0.2
1,403,634	-		Echvi_1223	0.77	+1.0
1,403,649	+		Echvi_1223	0.80	-0.8
1,403,649	+		Echvi_1223	0.80	-0.4
1,403,650	-		Echvi_1223	0.80	-0.2
1,403,694	+		Echvi_1223	0.87	-0.2
1,403,695	-		Echvi_1223	0.88	+1.5
1,403,717	+				-1.4
1,403,759	+				+0.7
1,403,759	+				-0.3
1,403,761	+				-0.1
1,403,761	+				-0.5
1,403,761	+				-0.1
1,403,761	+				-0.7
1,403,761	+				+0.5
1,403,761	+				+0.9
1,403,762	-				+0.9
1,403,762	-				+0.5
1,403,762	-				-0.0
1,403,762	-				-0.5
1,403,762	-				-0.1
1,403,762	-				-1.1
1,403,762	-				-0.0
1,403,762	-				-1.3
1,403,762	-				+0.1
1,403,784	+				+0.5
1,403,784	+				-2.6
1,403,791	+				-0.1
1,403,797	+				-0.6
1,403,798	-				+1.5
1,403,812	+				+0.9
1,403,813	-				+0.5
1,403,813	-				+0.4
1,403,830	+				-0.2
1,403,859	+				+0.5
1,403,927	-		Echvi_1224	0.11	-0.0
1,403,947	+		Echvi_1224	0.15	+0.2
1,403,948	-		Echvi_1224	0.15	+0.0
1,404,045	+		Echvi_1224	0.31	+0.8
1,404,045	+		Echvi_1224	0.31	+1.0
1,404,046	-		Echvi_1224	0.32	+0.2
1,404,046	-		Echvi_1224	0.32	+0.4
1,404,046	-		Echvi_1224	0.32	-0.2
1,404,052	-		Echvi_1224	0.33	+0.3
1,404,052	-		Echvi_1224	0.33	+0.7
1,404,085	+		Echvi_1224	0.38	+1.1
1,404,118	+		Echvi_1224	0.44	+0.1
1,404,118	+		Echvi_1224	0.44	+0.1
1,404,118	+		Echvi_1224	0.44	+0.0
1,404,118	+		Echvi_1224	0.44	+0.4
1,404,119	-		Echvi_1224	0.44	-0.1
1,404,119	-		Echvi_1224	0.44	+0.5
1,404,121	-		Echvi_1224	0.45	-0.2
1,404,126	+		Echvi_1224	0.45	+0.2
1,404,205	+		Echvi_1224	0.59	-0.0
1,404,205	+		Echvi_1224	0.59	-0.4
1,404,206	-		Echvi_1224	0.59	+0.3
1,404,206	-		Echvi_1224	0.59	+0.0
1,404,206	-		Echvi_1224	0.59	+0.5
1,404,244	+		Echvi_1224	0.66	+0.3
1,404,244	+		Echvi_1224	0.66	-0.2
1,404,244	+		Echvi_1224	0.66	+0.4
1,404,267	-		Echvi_1224	0.70	-0.1
1,404,267	-		Echvi_1224	0.70	+1.4
1,404,267	-		Echvi_1224	0.70	-0.4
1,404,267	-		Echvi_1224	0.70	+0.3
1,404,283	-		Echvi_1224	0.73	+0.5
1,404,283	-		Echvi_1224	0.73	-0.3
1,404,326	+		Echvi_1224	0.80	+0.3
1,404,340	+		Echvi_1224	0.82	+0.3
1,404,341	-		Echvi_1224	0.83	+0.1
1,404,341	-		Echvi_1224	0.83	+0.9
1,404,388	+				-0.0
1,404,388	+				+2.6
1,404,388	+				+0.8
1,404,420	+				-0.1
1,404,420	+				+0.6
1,404,420	+				+0.0
1,404,420	+				-0.0
1,404,421	-				+0.2
1,404,421	-				+0.2
1,404,421	-				+0.3
1,404,421	-				+0.2
1,404,439	+				+0.7
1,404,440	-				+0.3
1,404,487	+				+0.4
1,404,487	+				+0.8
1,404,491	+				-1.1
1,404,492	-				+0.6
1,404,492	-				+0.7
1,404,522	+				-0.1
1,404,523	-				+0.3
1,404,543	-				-1.3
1,404,600	-				-0.5
1,404,600	-				+0.9
1,404,657	+				-0.1
1,404,657	+				+1.4
1,404,658	-				-1.4
1,404,799	-		Echvi_1225	0.19	+0.1
1,404,800	+		Echvi_1225	0.19	-0.2
1,404,806	+		Echvi_1225	0.19	+0.7
1,404,819	+		Echvi_1225	0.20	-0.8
1,404,819	+		Echvi_1225	0.20	+0.3
1,404,819	+		Echvi_1225	0.20	-0.4
1,404,878	-		Echvi_1225	0.24	-0.1
1,404,886	-		Echvi_1225	0.24	-1.9
1,404,907	+		Echvi_1225	0.25	-0.7
1,404,939	+		Echvi_1225	0.27	-1.5
1,404,940	-				+0.7
1,404,958	-		Echvi_1225	0.28	+1.2
1,405,100	-		Echvi_1225	0.37	+0.8
1,405,100	-		Echvi_1225	0.37	-0.9
1,405,118	-		Echvi_1225	0.38	-0.7
1,405,118	-		Echvi_1225	0.38	-0.0
1,405,130	+		Echvi_1225	0.39	-0.9
1,405,130	+		Echvi_1225	0.39	-0.8
1,405,152	-		Echvi_1225	0.40	+0.7
1,405,434	+		Echvi_1225	0.58	+0.2