Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu6045 and Atu6046 are separated by 8 nucleotides Atu6046 and Atu6047 are separated by 111 nucleotides
Atu6045: Atu6045 - replication protein C, at 54,905 to 56,224
Atu6045
Atu6046: Atu6046 - DNA invertase, at 56,233 to 57,345
Atu6046
Atu6047: Atu6047 - conserved hypothetical protein, at 57,457 to 58,566
Atu6047
Position (kb) 56
57
58 Strain fitness (log2 ratio) -1
0
1
2
3 at 56.091 kb on + strand, within Atu6045 at 56.099 kb on - strand at 56.142 kb on + strand at 56.142 kb on + strand at 56.152 kb on - strand at 56.152 kb on - strand at 56.160 kb on - strand at 56.167 kb on - strand at 56.337 kb on + strand at 56.354 kb on + strand, within Atu6046 at 56.354 kb on + strand, within Atu6046 at 56.362 kb on - strand, within Atu6046 at 56.403 kb on + strand, within Atu6046 at 56.415 kb on + strand, within Atu6046 at 56.515 kb on + strand, within Atu6046 at 56.548 kb on - strand, within Atu6046 at 56.558 kb on - strand, within Atu6046 at 56.569 kb on + strand, within Atu6046 at 56.606 kb on + strand, within Atu6046 at 56.629 kb on + strand, within Atu6046 at 56.631 kb on + strand, within Atu6046 at 56.669 kb on + strand, within Atu6046 at 56.669 kb on - strand, within Atu6046 at 56.791 kb on - strand, within Atu6046 at 56.888 kb on + strand, within Atu6046 at 56.910 kb on + strand, within Atu6046 at 56.911 kb on - strand, within Atu6046 at 56.978 kb on + strand, within Atu6046 at 57.199 kb on - strand, within Atu6046 at 57.362 kb on + strand at 57.415 kb on + strand at 57.496 kb on + strand at 57.512 kb on + strand at 57.573 kb on - strand, within Atu6047 at 57.589 kb on + strand, within Atu6047 at 57.637 kb on - strand, within Atu6047 at 57.676 kb on - strand, within Atu6047 at 57.690 kb on - strand, within Atu6047 at 57.744 kb on + strand, within Atu6047 at 57.748 kb on + strand, within Atu6047 at 57.760 kb on + strand, within Atu6047 at 57.827 kb on - strand, within Atu6047 at 57.851 kb on + strand, within Atu6047 at 57.857 kb on + strand, within Atu6047 at 57.867 kb on + strand, within Atu6047 at 57.916 kb on - strand, within Atu6047 at 57.924 kb on - strand, within Atu6047 at 57.946 kb on - strand, within Atu6047 at 57.964 kb on - strand, within Atu6047 at 57.972 kb on + strand, within Atu6047 at 58.059 kb on + strand, within Atu6047 at 58.067 kb on - strand, within Atu6047 at 58.084 kb on + strand, within Atu6047 at 58.084 kb on + strand, within Atu6047 at 58.101 kb on + strand, within Atu6047 at 58.109 kb on - strand, within Atu6047 at 58.129 kb on - strand, within Atu6047 at 58.143 kb on + strand, within Atu6047 at 58.151 kb on - strand, within Atu6047 at 58.199 kb on + strand, within Atu6047 at 58.235 kb on - strand, within Atu6047 at 58.271 kb on - strand, within Atu6047 at 58.310 kb on + strand, within Atu6047 at 58.310 kb on + strand, within Atu6047 at 58.310 kb on + strand, within Atu6047 at 58.310 kb on + strand, within Atu6047 at 58.310 kb on + strand, within Atu6047 at 58.310 kb on + strand, within Atu6047 at 58.318 kb on - strand, within Atu6047 at 58.318 kb on - strand, within Atu6047 at 58.318 kb on - strand, within Atu6047 at 58.318 kb on - strand, within Atu6047 at 58.328 kb on - strand, within Atu6047
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 56,091 + Atu6045 0.90 +0.4 56,099 - +0.1 56,142 + +1.6 56,142 + +2.3 56,152 - -0.7 56,152 - +0.9 56,160 - +0.2 56,167 - -0.0 56,337 + +2.5 56,354 + Atu6046 0.11 -0.1 56,354 + Atu6046 0.11 -0.8 56,362 - Atu6046 0.12 -0.7 56,403 + Atu6046 0.15 -0.6 56,415 + Atu6046 0.16 -0.1 56,515 + Atu6046 0.25 -0.1 56,548 - Atu6046 0.28 +0.2 56,558 - Atu6046 0.29 -0.2 56,569 + Atu6046 0.30 -1.7 56,606 + Atu6046 0.34 -0.5 56,629 + Atu6046 0.36 -0.9 56,631 + Atu6046 0.36 +0.1 56,669 + Atu6046 0.39 -0.3 56,669 - Atu6046 0.39 -1.3 56,791 - Atu6046 0.50 -0.6 56,888 + Atu6046 0.59 -0.0 56,910 + Atu6046 0.61 -0.1 56,911 - Atu6046 0.61 -0.5 56,978 + Atu6046 0.67 +0.2 57,199 - Atu6046 0.87 -0.1 57,362 + -0.4 57,415 + -0.5 57,496 + -0.9 57,512 + +2.9 57,573 - Atu6047 0.10 -1.3 57,589 + Atu6047 0.12 +0.3 57,637 - Atu6047 0.16 +0.3 57,676 - Atu6047 0.20 +1.2 57,690 - Atu6047 0.21 +1.2 57,744 + Atu6047 0.26 +0.7 57,748 + Atu6047 0.26 -0.6 57,760 + Atu6047 0.27 +0.5 57,827 - Atu6047 0.33 +0.2 57,851 + Atu6047 0.35 -0.2 57,857 + Atu6047 0.36 +0.5 57,867 + Atu6047 0.37 +0.5 57,916 - Atu6047 0.41 -0.2 57,924 - Atu6047 0.42 -0.4 57,946 - Atu6047 0.44 +0.5 57,964 - Atu6047 0.46 +0.1 57,972 + Atu6047 0.46 -0.1 58,059 + Atu6047 0.54 -0.5 58,067 - Atu6047 0.55 +0.5 58,084 + Atu6047 0.56 +2.3 58,084 + Atu6047 0.56 -1.7 58,101 + Atu6047 0.58 -0.8 58,109 - Atu6047 0.59 +0.4 58,129 - Atu6047 0.61 -0.4 58,143 + Atu6047 0.62 -1.1 58,151 - Atu6047 0.63 -1.0 58,199 + Atu6047 0.67 +0.7 58,235 - Atu6047 0.70 +0.3 58,271 - Atu6047 0.73 +0.2 58,310 + Atu6047 0.77 +0.3 58,310 + Atu6047 0.77 +0.9 58,310 + Atu6047 0.77 -0.1 58,310 + Atu6047 0.77 -0.4 58,310 + Atu6047 0.77 +0.5 58,310 + Atu6047 0.77 +0.1 58,318 - Atu6047 0.78 +1.2 58,318 - Atu6047 0.78 +0.9 58,318 - Atu6047 0.78 +0.5 58,318 - Atu6047 0.78 +0.5 58,328 - Atu6047 0.78 +0.2
Or see this region's nucleotide sequence