Strain Fitness in Escherichia coli BW25113 around b2599
Experiment: Fusidic 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,734,833 | + | -0.1 | |||
2,734,848 | - | -1.3 | |||
2,734,979 | + | +0.0 | |||
2,734,996 | - | -1.1 | |||
2,734,996 | - | -1.0 | |||
2,735,339 | + | yfiA | b2597 | 0.48 | -0.0 |
2,735,512 | + | +0.2 | |||
2,735,520 | - | +0.2 | |||
2,735,555 | - | +0.3 | |||
2,735,555 | - | -0.1 | |||
2,735,688 | + | +0.9 | |||
2,735,719 | - | +0.4 | |||
2,735,782 | + | +0.9 | |||
2,735,782 | + | -0.4 | |||
2,735,877 | + | -1.5 | |||
2,735,877 | + | -0.3 | |||
2,735,928 | - | pheA | b2599 | 0.14 | +0.6 |
2,735,994 | + | pheA | b2599 | 0.20 | +0.5 |
2,736,002 | - | pheA | b2599 | 0.20 | +1.3 |
2,736,002 | - | pheA | b2599 | 0.20 | +0.0 |
2,736,085 | + | pheA | b2599 | 0.27 | -0.1 |
2,736,085 | + | pheA | b2599 | 0.27 | +0.9 |
2,736,139 | - | pheA | b2599 | 0.32 | -0.2 |
2,736,272 | + | pheA | b2599 | 0.43 | -1.1 |
2,736,382 | + | pheA | b2599 | 0.53 | +0.5 |
2,736,382 | + | pheA | b2599 | 0.53 | +0.3 |
2,736,390 | - | pheA | b2599 | 0.54 | +0.1 |
2,736,390 | - | pheA | b2599 | 0.54 | +0.1 |
2,736,390 | - | pheA | b2599 | 0.54 | -1.7 |
2,736,395 | - | pheA | b2599 | 0.54 | -0.9 |
2,736,409 | - | pheA | b2599 | 0.55 | -0.1 |
2,736,409 | - | pheA | b2599 | 0.55 | -0.7 |
2,736,411 | - | pheA | b2599 | 0.55 | +0.1 |
2,736,411 | - | pheA | b2599 | 0.55 | -1.5 |
2,736,534 | - | pheA | b2599 | 0.66 | +0.9 |
2,736,549 | - | pheA | b2599 | 0.67 | +0.9 |
2,736,567 | - | pheA | b2599 | 0.69 | -1.1 |
2,736,633 | + | pheA | b2599 | 0.75 | -0.5 |
2,736,634 | - | pheA | b2599 | 0.75 | +0.5 |
2,736,710 | + | pheA | b2599 | 0.81 | +0.7 |
2,736,710 | + | pheA | b2599 | 0.81 | +0.4 |
2,736,746 | + | pheA | b2599 | 0.84 | -0.5 |
2,736,905 | - | +0.4 | |||
2,736,942 | - | -0.2 | |||
2,736,952 | - | -0.1 | |||
2,737,058 | - | -0.6 | |||
2,737,175 | - | tyrA | b2600 | 0.18 | +1.1 |
2,737,294 | + | tyrA | b2600 | 0.29 | -0.1 |
2,737,399 | - | tyrA | b2600 | 0.38 | -1.6 |
2,737,589 | - | tyrA | b2600 | 0.55 | -0.3 |
2,737,698 | - | tyrA | b2600 | 0.65 | -0.1 |
2,737,698 | - | tyrA | b2600 | 0.65 | +0.1 |
2,737,712 | - | tyrA | b2600 | 0.66 | +0.9 |
2,737,753 | - | tyrA | b2600 | 0.70 | +0.0 |
2,737,753 | - | tyrA | b2600 | 0.70 | -0.3 |
2,737,877 | - | tyrA | b2600 | 0.81 | -1.9 |
2,737,877 | - | tyrA | b2600 | 0.81 | +0.0 |
2,737,890 | - | tyrA | b2600 | 0.82 | -1.0 |
Or see this region's nucleotide sequence