Strain Fitness in Escherichia coli BW25113 around b2071
Experiment: Fusidic 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,148,220 | + | yegI | b2070 | 0.59 | -1.1 |
2,148,225 | - | yegI | b2070 | 0.60 | -0.4 |
2,148,260 | + | yegI | b2070 | 0.61 | -0.0 |
2,148,339 | + | yegI | b2070 | 0.66 | -0.2 |
2,148,339 | + | yegI | b2070 | 0.66 | -0.6 |
2,148,360 | + | yegI | b2070 | 0.67 | +1.4 |
2,148,455 | - | yegI | b2070 | 0.71 | -0.5 |
2,148,493 | - | yegI | b2070 | 0.73 | +2.8 |
2,148,493 | - | yegI | b2070 | 0.73 | +0.1 |
2,148,543 | - | yegI | b2070 | 0.76 | -0.4 |
2,148,567 | - | yegI | b2070 | 0.77 | +0.2 |
2,148,582 | - | yegI | b2070 | 0.78 | +0.6 |
2,148,591 | + | yegI | b2070 | 0.78 | -0.2 |
2,148,618 | - | yegI | b2070 | 0.80 | -0.0 |
2,148,766 | + | yegI | b2070 | 0.87 | +2.8 |
2,148,774 | + | yegI | b2070 | 0.88 | -0.7 |
2,148,777 | - | yegI | b2070 | 0.88 | -0.8 |
2,148,782 | + | yegI | b2070 | 0.88 | +0.2 |
2,148,782 | + | yegI | b2070 | 0.88 | +0.8 |
2,148,854 | - | +0.0 | |||
2,148,932 | + | +0.8 | |||
2,148,934 | + | +0.2 | |||
2,148,934 | + | -0.2 | |||
2,148,939 | + | -0.1 | |||
2,148,949 | + | +0.2 | |||
2,148,949 | + | -0.8 | |||
2,148,955 | + | +0.8 | |||
2,148,956 | + | +1.2 | |||
2,148,956 | + | -1.8 | |||
2,148,956 | + | +1.3 | |||
2,148,973 | + | +0.6 | |||
2,149,410 | + | yegJ | b2071 | 0.44 | -1.4 |
2,149,433 | + | yegJ | b2071 | 0.48 | +0.3 |
2,149,438 | + | yegJ | b2071 | 0.50 | -1.2 |
2,149,575 | - | yegJ | b2071 | 0.79 | -0.5 |
2,149,632 | - | -1.6 | |||
2,149,660 | - | +0.2 | |||
2,149,660 | - | -0.7 | |||
2,149,757 | - | +0.4 | |||
2,149,757 | - | +1.8 | |||
2,149,776 | - | +0.8 | |||
2,149,776 | - | -1.4 | |||
2,149,901 | + | yegK | b2072 | 0.22 | -0.6 |
2,149,909 | - | yegK | b2072 | 0.23 | +0.4 |
2,149,909 | - | yegK | b2072 | 0.23 | +0.4 |
2,149,973 | + | yegK | b2072 | 0.31 | -0.2 |
2,149,981 | - | yegK | b2072 | 0.32 | -1.1 |
2,150,081 | - | yegK | b2072 | 0.45 | -0.6 |
2,150,081 | - | yegK | b2072 | 0.45 | -0.6 |
2,150,299 | - | yegK | b2072 | 0.74 | -0.0 |
2,150,330 | + | yegK | b2072 | 0.78 | -0.6 |
2,150,330 | + | yegK | b2072 | 0.78 | -2.2 |
2,150,338 | - | yegK | b2072 | 0.79 | -0.1 |
2,150,633 | + | yegL | b2073 | 0.21 | +0.8 |
2,150,650 | + | yegL | b2073 | 0.24 | +1.6 |
Or see this region's nucleotide sequence