Strain Fitness in Escherichia coli BW25113 around b0109

Experiment: Fusidic 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.03 mg/ml
116,760	-	hofB	b0107	0.75	+0.5
116,777	+	hofB	b0107	0.77	+0.4
116,777	+	hofB	b0107	0.77	+0.7
116,872	+	hofB	b0107	0.84	-0.2
116,882	+	hofB	b0107	0.84	+0.4
116,957	-	hofB	b0107	0.90	-0.1
116,964	-				-0.2
117,046	+				-0.7
117,056	+				+0.2
117,069	+				+0.7
117,075	+				-1.2
117,075	+				-1.0
117,075	+				+0.2
117,081	-				+1.1
117,081	-				+1.5
117,084	+				+1.1
117,087	+				-0.2
117,227	-	ppdD	b0108	0.27	-0.3
117,281	+	ppdD	b0108	0.39	-0.7
117,281	+	ppdD	b0108	0.39	+0.4
117,293	-	ppdD	b0108	0.42	+0.0
117,302	+	ppdD	b0108	0.44	+0.5
117,302	+	ppdD	b0108	0.44	-0.2
117,385	+	ppdD	b0108	0.63	-0.3
117,387	+	ppdD	b0108	0.63	-1.0
117,508	-				-0.2
117,508	-				+0.8
117,511	-				+0.5
117,511	-				-0.5
117,525	-				-0.2
117,525	-				-0.2
117,603	+				+0.5
117,603	+				-1.6
117,839	+				+0.4
117,856	-	nadC	b0109	0.12	+0.8
117,856	-	nadC	b0109	0.12	+0.4
117,879	-	nadC	b0109	0.14	-0.2
117,879	-	nadC	b0109	0.14	-0.0
117,881	-	nadC	b0109	0.14	+0.5
117,922	-	nadC	b0109	0.19	+0.4
117,922	-	nadC	b0109	0.19	+0.3
118,107	-	nadC	b0109	0.40	-0.9
118,201	+	nadC	b0109	0.50	+0.6
118,230	+	nadC	b0109	0.53	-0.0
118,230	+	nadC	b0109	0.53	+0.4
118,296	+	nadC	b0109	0.61	-0.7
118,355	-	nadC	b0109	0.67	+0.8
118,355	-	nadC	b0109	0.67	-2.5
118,364	+	nadC	b0109	0.68	-0.6
118,382	-	nadC	b0109	0.70	+0.3
118,538	+	nadC	b0109	0.88	+0.6
118,623	+				+1.3
118,631	-				-0.5
118,737	+				-0.0
118,737	+				+0.6
118,781	+				+0.4
118,836	+	ampD	b0110	0.19	+0.2
118,868	+	ampD	b0110	0.24	+0.1
118,868	+	ampD	b0110	0.24	+1.8
118,904	-	ampD	b0110	0.31	-0.1
119,033	-	ampD	b0110	0.54	-0.2
119,101	+	ampD	b0110	0.67	+0.3
119,109	-	ampD	b0110	0.68	+0.5
119,109	-	ampD	b0110	0.68	-0.5
119,117	-	ampD	b0110	0.70	-0.5
119,119	+	ampD	b0110	0.70	-0.7
119,150	-	ampD	b0110	0.76	-0.2
119,150	-	ampD	b0110	0.76	-0.2
119,163	+	ampD	b0110	0.78	+1.0
119,168	-	ampD	b0110	0.79	+0.1
119,191	+	ampD	b0110	0.83	+0.2
119,191	+	ampD	b0110	0.83	+1.0
119,274	+				-0.0
119,339	+				-1.2
119,339	+				+1.3
119,499	-	ampE	b0111	0.25	-1.6
119,499	-	ampE	b0111	0.25	+0.1
119,522	+	ampE	b0111	0.28	-1.4
119,528	-	ampE	b0111	0.29	+0.8
119,555	-	ampE	b0111	0.32	-0.2
119,555	-	ampE	b0111	0.32	-0.7
119,558	-	ampE	b0111	0.32	+0.8
119,567	+	ampE	b0111	0.33	-0.2
119,567	+	ampE	b0111	0.33	-0.5