Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2328 and PfGW456L13_2329 are separated by 18 nucleotides PfGW456L13_2329 and PfGW456L13_2330 overlap by 8 nucleotides PfGW456L13_2330 and PfGW456L13_2331 overlap by 4 nucleotides
PfGW456L13_2328 - L-Proline/Glycine betaine transporter ProP, at 2,559,293 to 2,560,672
_2328
PfGW456L13_2329 - Endoribonuclease L-PSP, at 2,560,691 to 2,561,083
_2329
PfGW456L13_2330 - Demethylmenaquinone methyltransferase, at 2,561,076 to 2,561,687
_2330
PfGW456L13_2331 - Cys regulon transcriptional activator CysB, at 2,561,684 to 2,562,601
_2331
Position (kb)
2561
2562 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2560.090 kb on + strand, within PfGW456L13_2328 at 2560.112 kb on + strand, within PfGW456L13_2328 at 2560.113 kb on - strand, within PfGW456L13_2328 at 2560.113 kb on - strand, within PfGW456L13_2328 at 2560.113 kb on - strand, within PfGW456L13_2328 at 2560.331 kb on + strand, within PfGW456L13_2328 at 2560.364 kb on + strand, within PfGW456L13_2328 at 2560.364 kb on + strand, within PfGW456L13_2328 at 2560.365 kb on - strand, within PfGW456L13_2328 at 2560.436 kb on + strand, within PfGW456L13_2328 at 2560.436 kb on + strand, within PfGW456L13_2328 at 2560.436 kb on + strand, within PfGW456L13_2328 at 2560.436 kb on + strand, within PfGW456L13_2328 at 2560.436 kb on + strand, within PfGW456L13_2328 at 2560.436 kb on + strand, within PfGW456L13_2328 at 2560.436 kb on + strand, within PfGW456L13_2328 at 2560.436 kb on + strand, within PfGW456L13_2328 at 2560.436 kb on + strand, within PfGW456L13_2328 at 2560.436 kb on + strand, within PfGW456L13_2328 at 2560.436 kb on + strand, within PfGW456L13_2328 at 2560.437 kb on - strand, within PfGW456L13_2328 at 2560.437 kb on - strand, within PfGW456L13_2328 at 2560.437 kb on - strand, within PfGW456L13_2328 at 2560.437 kb on - strand, within PfGW456L13_2328 at 2560.437 kb on - strand, within PfGW456L13_2328 at 2560.437 kb on - strand, within PfGW456L13_2328 at 2560.437 kb on - strand, within PfGW456L13_2328 at 2560.437 kb on - strand, within PfGW456L13_2328 at 2560.437 kb on - strand, within PfGW456L13_2328 at 2560.437 kb on - strand, within PfGW456L13_2328 at 2560.437 kb on - strand, within PfGW456L13_2328 at 2560.437 kb on - strand, within PfGW456L13_2328 at 2560.475 kb on - strand, within PfGW456L13_2328 at 2560.529 kb on + strand, within PfGW456L13_2328 at 2560.529 kb on + strand, within PfGW456L13_2328 at 2560.529 kb on + strand, within PfGW456L13_2328 at 2560.529 kb on + strand, within PfGW456L13_2328 at 2560.530 kb on - strand, within PfGW456L13_2328 at 2560.530 kb on - strand, within PfGW456L13_2328 at 2560.530 kb on - strand, within PfGW456L13_2328 at 2560.663 kb on + strand at 2560.685 kb on + strand at 2560.685 kb on + strand at 2560.685 kb on + strand at 2560.686 kb on - strand at 2560.686 kb on - strand at 2560.718 kb on + strand at 2560.839 kb on + strand, within PfGW456L13_2329 at 2560.840 kb on - strand, within PfGW456L13_2329 at 2560.961 kb on + strand, within PfGW456L13_2329 at 2560.961 kb on + strand, within PfGW456L13_2329 at 2561.025 kb on + strand, within PfGW456L13_2329 at 2561.188 kb on + strand, within PfGW456L13_2330 at 2561.189 kb on - strand, within PfGW456L13_2330 at 2561.189 kb on - strand, within PfGW456L13_2330 at 2561.189 kb on - strand, within PfGW456L13_2330 at 2561.370 kb on - strand, within PfGW456L13_2330 at 2561.685 kb on + strand at 2562.085 kb on - strand, within PfGW456L13_2331 at 2562.632 kb on + strand at 2562.633 kb on - strand at 2562.633 kb on - strand at 2562.681 kb on + strand at 2562.682 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 2,560,090 + PfGW456L13_2328 0.58 +1.6 2,560,112 + PfGW456L13_2328 0.59 +0.4 2,560,113 - PfGW456L13_2328 0.59 +2.5 2,560,113 - PfGW456L13_2328 0.59 +1.4 2,560,113 - PfGW456L13_2328 0.59 -0.8 2,560,331 + PfGW456L13_2328 0.75 -1.8 2,560,364 + PfGW456L13_2328 0.78 -1.3 2,560,364 + PfGW456L13_2328 0.78 -1.6 2,560,365 - PfGW456L13_2328 0.78 +2.8 2,560,436 + PfGW456L13_2328 0.83 +0.7 2,560,436 + PfGW456L13_2328 0.83 +0.2 2,560,436 + PfGW456L13_2328 0.83 -0.5 2,560,436 + PfGW456L13_2328 0.83 -0.2 2,560,436 + PfGW456L13_2328 0.83 +3.2 2,560,436 + PfGW456L13_2328 0.83 -2.3 2,560,436 + PfGW456L13_2328 0.83 -2.9 2,560,436 + PfGW456L13_2328 0.83 +2.0 2,560,436 + PfGW456L13_2328 0.83 -3.5 2,560,436 + PfGW456L13_2328 0.83 +0.9 2,560,436 + PfGW456L13_2328 0.83 -0.5 2,560,437 - PfGW456L13_2328 0.83 +1.6 2,560,437 - PfGW456L13_2328 0.83 -1.2 2,560,437 - PfGW456L13_2328 0.83 +1.9 2,560,437 - PfGW456L13_2328 0.83 -1.3 2,560,437 - PfGW456L13_2328 0.83 +0.5 2,560,437 - PfGW456L13_2328 0.83 +1.8 2,560,437 - PfGW456L13_2328 0.83 +0.5 2,560,437 - PfGW456L13_2328 0.83 -0.3 2,560,437 - PfGW456L13_2328 0.83 -1.8 2,560,437 - PfGW456L13_2328 0.83 +2.4 2,560,437 - PfGW456L13_2328 0.83 -1.7 2,560,437 - PfGW456L13_2328 0.83 -0.6 2,560,475 - PfGW456L13_2328 0.86 +0.9 2,560,529 + PfGW456L13_2328 0.90 +1.5 2,560,529 + PfGW456L13_2328 0.90 +0.5 2,560,529 + PfGW456L13_2328 0.90 -2.4 2,560,529 + PfGW456L13_2328 0.90 +2.6 2,560,530 - PfGW456L13_2328 0.90 +0.1 2,560,530 - PfGW456L13_2328 0.90 +2.7 2,560,530 - PfGW456L13_2328 0.90 -2.4 2,560,663 + +0.7 2,560,685 + -0.5 2,560,685 + -1.5 2,560,685 + +0.4 2,560,686 - -0.5 2,560,686 - -0.4 2,560,718 + +1.8 2,560,839 + PfGW456L13_2329 0.38 -2.0 2,560,840 - PfGW456L13_2329 0.38 +1.7 2,560,961 + PfGW456L13_2329 0.69 +1.2 2,560,961 + PfGW456L13_2329 0.69 +1.0 2,561,025 + PfGW456L13_2329 0.85 -2.3 2,561,188 + PfGW456L13_2330 0.18 -0.4 2,561,189 - PfGW456L13_2330 0.18 -3.5 2,561,189 - PfGW456L13_2330 0.18 -1.8 2,561,189 - PfGW456L13_2330 0.18 -1.5 2,561,370 - PfGW456L13_2330 0.48 -3.1 2,561,685 + -2.0 2,562,085 - PfGW456L13_2331 0.44 -1.4 2,562,632 + +0.6 2,562,633 - -1.5 2,562,633 - +1.3 2,562,681 + +2.0 2,562,682 - -0.6
Or see this region's nucleotide sequence