Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1185 and PfGW456L13_1186 are separated by 122 nucleotides PfGW456L13_1186 and PfGW456L13_1187 are separated by 67 nucleotides
PfGW456L13_1185 - sensory box/GGDEF domain/EAL domain protein, at 1,319,022 to 1,322,768
_1185
PfGW456L13_1186 - RNA polymerase sigma factor RpoD, at 1,322,891 to 1,324,738
_1186
PfGW456L13_1187 - DNA primase (EC 2.7.7.-), at 1,324,806 to 1,326,773
_1187
Position (kb)
1322
1323
1324
1325 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1321.957 kb on + strand, within PfGW456L13_1185 at 1321.957 kb on + strand, within PfGW456L13_1185 at 1321.957 kb on + strand, within PfGW456L13_1185 at 1322.098 kb on - strand, within PfGW456L13_1185 at 1322.122 kb on + strand, within PfGW456L13_1185 at 1322.143 kb on + strand, within PfGW456L13_1185 at 1322.143 kb on + strand, within PfGW456L13_1185 at 1322.143 kb on + strand, within PfGW456L13_1185 at 1322.143 kb on + strand, within PfGW456L13_1185 at 1322.143 kb on + strand, within PfGW456L13_1185 at 1322.143 kb on + strand, within PfGW456L13_1185 at 1322.143 kb on + strand, within PfGW456L13_1185 at 1322.143 kb on + strand, within PfGW456L13_1185 at 1322.143 kb on + strand, within PfGW456L13_1185 at 1322.143 kb on + strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.144 kb on - strand, within PfGW456L13_1185 at 1322.211 kb on + strand, within PfGW456L13_1185 at 1322.212 kb on - strand, within PfGW456L13_1185 at 1322.311 kb on + strand, within PfGW456L13_1185 at 1322.312 kb on - strand, within PfGW456L13_1185 at 1322.312 kb on - strand, within PfGW456L13_1185 at 1322.312 kb on - strand, within PfGW456L13_1185 at 1322.342 kb on - strand, within PfGW456L13_1185 at 1322.357 kb on + strand, within PfGW456L13_1185 at 1322.358 kb on - strand, within PfGW456L13_1185 at 1322.358 kb on - strand, within PfGW456L13_1185 at 1322.410 kb on + strand at 1322.410 kb on + strand at 1322.431 kb on + strand at 1322.431 kb on + strand at 1322.432 kb on - strand at 1322.489 kb on + strand at 1322.489 kb on + strand at 1322.490 kb on - strand at 1322.490 kb on - strand at 1322.572 kb on + strand at 1322.573 kb on - strand at 1322.678 kb on + strand at 1322.678 kb on + strand at 1322.678 kb on + strand at 1322.678 kb on + strand at 1322.678 kb on + strand at 1322.678 kb on + strand at 1322.678 kb on + strand at 1322.678 kb on + strand at 1322.678 kb on + strand at 1322.679 kb on - strand at 1322.679 kb on - strand at 1322.679 kb on - strand at 1322.679 kb on - strand at 1322.679 kb on - strand at 1322.679 kb on - strand at 1322.679 kb on - strand at 1322.679 kb on - strand at 1322.679 kb on - strand at 1322.768 kb on + strand at 1322.806 kb on + strand at 1322.806 kb on + strand at 1322.807 kb on - strand at 1322.844 kb on + strand at 1322.844 kb on + strand at 1322.844 kb on + strand at 1322.845 kb on - strand at 1322.845 kb on - strand at 1322.845 kb on - strand at 1322.851 kb on + strand at 1322.851 kb on + strand at 1322.851 kb on + strand at 1322.851 kb on + strand at 1322.851 kb on + strand at 1322.852 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,321,957 + PfGW456L13_1185 0.78 -1.1 1,321,957 + PfGW456L13_1185 0.78 +0.8 1,321,957 + PfGW456L13_1185 0.78 -1.0 1,322,098 - PfGW456L13_1185 0.82 +2.0 1,322,122 + PfGW456L13_1185 0.83 +0.3 1,322,143 + PfGW456L13_1185 0.83 -3.0 1,322,143 + PfGW456L13_1185 0.83 -1.1 1,322,143 + PfGW456L13_1185 0.83 -2.1 1,322,143 + PfGW456L13_1185 0.83 +0.3 1,322,143 + PfGW456L13_1185 0.83 +1.2 1,322,143 + PfGW456L13_1185 0.83 -0.4 1,322,143 + PfGW456L13_1185 0.83 -0.2 1,322,143 + PfGW456L13_1185 0.83 +1.4 1,322,143 + PfGW456L13_1185 0.83 -0.0 1,322,143 + PfGW456L13_1185 0.83 -0.5 1,322,144 - PfGW456L13_1185 0.83 -0.4 1,322,144 - PfGW456L13_1185 0.83 +2.5 1,322,144 - PfGW456L13_1185 0.83 -0.1 1,322,144 - PfGW456L13_1185 0.83 -0.5 1,322,144 - PfGW456L13_1185 0.83 +0.4 1,322,144 - PfGW456L13_1185 0.83 -0.1 1,322,144 - PfGW456L13_1185 0.83 -0.8 1,322,144 - PfGW456L13_1185 0.83 -0.6 1,322,144 - PfGW456L13_1185 0.83 +0.6 1,322,144 - PfGW456L13_1185 0.83 +0.1 1,322,144 - PfGW456L13_1185 0.83 -0.2 1,322,144 - PfGW456L13_1185 0.83 +1.6 1,322,144 - PfGW456L13_1185 0.83 +0.6 1,322,144 - PfGW456L13_1185 0.83 -1.2 1,322,144 - PfGW456L13_1185 0.83 -0.3 1,322,144 - PfGW456L13_1185 0.83 -1.4 1,322,144 - PfGW456L13_1185 0.83 +0.9 1,322,144 - PfGW456L13_1185 0.83 +1.3 1,322,211 + PfGW456L13_1185 0.85 +1.0 1,322,212 - PfGW456L13_1185 0.85 -2.0 1,322,311 + PfGW456L13_1185 0.88 +0.8 1,322,312 - PfGW456L13_1185 0.88 -1.1 1,322,312 - PfGW456L13_1185 0.88 -0.7 1,322,312 - PfGW456L13_1185 0.88 +1.7 1,322,342 - PfGW456L13_1185 0.89 +1.2 1,322,357 + PfGW456L13_1185 0.89 +0.2 1,322,358 - PfGW456L13_1185 0.89 +0.8 1,322,358 - PfGW456L13_1185 0.89 +0.3 1,322,410 + +1.2 1,322,410 + +2.7 1,322,431 + +1.2 1,322,431 + +1.5 1,322,432 - +1.3 1,322,489 + +1.0 1,322,489 + +1.6 1,322,490 - -3.3 1,322,490 - +1.3 1,322,572 + -0.0 1,322,573 - -0.7 1,322,678 + +1.2 1,322,678 + -0.5 1,322,678 + +2.4 1,322,678 + +0.7 1,322,678 + -2.4 1,322,678 + -2.1 1,322,678 + +1.5 1,322,678 + -1.0 1,322,678 + +1.4 1,322,679 - +1.0 1,322,679 - -0.8 1,322,679 - +3.0 1,322,679 - +0.3 1,322,679 - +1.6 1,322,679 - +2.0 1,322,679 - +1.0 1,322,679 - -0.4 1,322,679 - -1.7 1,322,768 + -0.5 1,322,806 + -0.0 1,322,806 + -0.3 1,322,807 - -0.1 1,322,844 + -0.6 1,322,844 + +0.7 1,322,844 + -0.5 1,322,845 - -1.6 1,322,845 - -0.6 1,322,845 - -0.3 1,322,851 + +1.7 1,322,851 + -0.9 1,322,851 + +1.5 1,322,851 + -1.9 1,322,851 + -0.9 1,322,852 - -3.3
Or see this region's nucleotide sequence