Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_09320 and PS417_09325 are separated by 118 nucleotides PS417_09325 and PS417_09330 are separated by 105 nucleotides
PS417_09320: PS417_09320 - diguanylate phosphodiesterase, at 2,020,889 to 2,022,658
_09320
PS417_09325: PS417_09325 - peptidase S41, at 2,022,777 to 2,024,891
_09325
PS417_09330: PS417_09330 - NAD(P)H-quinone oxidoreductase, at 2,024,997 to 2,025,959
_09330
Position (kb)
2022
2023
2024
2025 Strain fitness (log2 ratio)
-2
-1
0
1 at 2022.139 kb on - strand, within PS417_09320 at 2022.732 kb on + strand at 2022.733 kb on - strand at 2022.733 kb on - strand at 2022.733 kb on - strand at 2022.733 kb on - strand at 2022.734 kb on + strand at 2022.734 kb on + strand at 2022.735 kb on - strand at 2022.735 kb on - strand at 2022.763 kb on + strand at 2023.403 kb on - strand, within PS417_09325 at 2023.768 kb on + strand, within PS417_09325 at 2024.157 kb on - strand, within PS417_09325 at 2024.170 kb on + strand, within PS417_09325 at 2024.171 kb on - strand, within PS417_09325 at 2024.516 kb on - strand, within PS417_09325 at 2024.522 kb on + strand, within PS417_09325 at 2024.891 kb on + strand at 2024.891 kb on + strand at 2024.891 kb on + strand at 2024.892 kb on - strand at 2024.894 kb on + strand at 2024.894 kb on + strand at 2024.958 kb on - strand at 2025.053 kb on + strand at 2025.351 kb on + strand, within PS417_09330 at 2025.624 kb on + strand, within PS417_09330 at 2025.624 kb on + strand, within PS417_09330 at 2025.742 kb on + strand, within PS417_09330 at 2025.742 kb on + strand, within PS417_09330
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 2,022,139 - PS417_09320 0.71 -0.0 2,022,732 + +0.3 2,022,733 - -0.6 2,022,733 - +0.8 2,022,733 - +0.1 2,022,733 - +0.6 2,022,734 + -0.8 2,022,734 + +0.8 2,022,735 - -0.6 2,022,735 - -0.1 2,022,763 + -0.6 2,023,403 - PS417_09325 0.30 -0.1 2,023,768 + PS417_09325 0.47 -0.2 2,024,157 - PS417_09325 0.65 -1.1 2,024,170 + PS417_09325 0.66 -0.6 2,024,171 - PS417_09325 0.66 -1.8 2,024,516 - PS417_09325 0.82 -0.1 2,024,522 + PS417_09325 0.83 -0.5 2,024,891 + -0.0 2,024,891 + -0.9 2,024,891 + -0.6 2,024,892 - +0.3 2,024,894 + -0.1 2,024,894 + -0.6 2,024,958 - -0.1 2,025,053 + +0.8 2,025,351 + PS417_09330 0.37 -0.2 2,025,624 + PS417_09330 0.65 -0.4 2,025,624 + PS417_09330 0.65 +0.1 2,025,742 + PS417_09330 0.77 +0.4 2,025,742 + PS417_09330 0.77 +1.0
Or see this region's nucleotide sequence