Strain Fitness in Escherichia coli BW25113 around b4135

Experiment: Bacitracin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 1 mg/ml
4,359,756	-	cadC	b4133	0.87	-1.9
4,359,756	-	cadC	b4133	0.87	+0.0
4,359,756	-	cadC	b4133	0.87	+0.6
4,359,758	+	cadC	b4133	0.87	+0.8
4,359,763	+	cadC	b4133	0.87	-0.3
4,359,764	-	cadC	b4133	0.87	-1.1
4,359,764	-	cadC	b4133	0.87	+0.6
4,359,779	-	cadC	b4133	0.88	+0.4
4,359,779	-	cadC	b4133	0.88	-0.4
4,359,779	-	cadC	b4133	0.88	-0.1
4,359,789	-	cadC	b4133	0.89	+0.1
4,359,789	-	cadC	b4133	0.89	-1.7
4,359,789	-	cadC	b4133	0.89	+1.8
4,359,789	-	cadC	b4133	0.89	+0.4
4,359,801	-	cadC	b4133	0.90	-3.0
4,359,801	-	cadC	b4133	0.90	-0.6
4,359,809	+				+0.4
4,359,819	+				-0.3
4,359,824	-				+0.1
4,359,824	-				+1.3
4,359,829	+				+1.4
4,359,829	+				+1.1
4,359,829	+				-0.1
4,359,829	+				-0.2
4,359,831	+				-0.1
4,359,837	-				+1.3
4,359,837	-				+0.6
4,359,837	-				-0.1
4,359,837	-				-1.3
4,359,837	-				+1.0
4,359,839	-				+0.6
4,359,869	-				+2.8
4,359,872	+				+0.8
4,359,872	+				-1.9
4,359,872	+				-1.0
4,359,873	+				+1.4
4,359,874	+				+0.9
4,359,880	-				+0.9
4,359,881	-				-1.1
4,359,881	-				-0.3
4,359,881	-				-0.4
4,359,884	+				+0.4
4,359,898	+				-0.2
4,359,898	+				-0.7
4,359,917	+				-0.3
4,359,917	+				-0.6
4,359,917	+				-0.3
4,359,917	+				-1.0
4,359,923	-				-0.0
4,359,925	-				+0.6
4,359,925	-				-0.7
4,359,930	+				+0.3
4,359,940	+				-0.9
4,359,942	+				+1.5
4,359,954	+				+0.4
4,360,009	+				+1.4
4,360,083	-				-0.3
4,360,096	-				+0.2
4,360,138	-				-2.1
4,360,222	-				+2.0
4,360,247	+	yjdQ	b4654	0.20	-0.9
4,360,253	-	yjdQ	b4654	0.24	-1.5
4,360,265	-	yjdQ	b4654	0.31	+0.9
4,360,312	-	yjdQ	b4654	0.60	+1.7
4,360,314	+	yjdQ	b4654	0.61	+1.1
4,360,319	+	yjdQ	b4654	0.64	-0.9
4,360,322	-	yjdQ	b4654	0.66	+1.4
4,360,322	-	yjdQ	b4654	0.66	+0.4
4,360,322	-	yjdQ	b4654	0.66	-0.7
4,360,322	-	yjdQ	b4654	0.66	-0.7
4,360,322	-	yjdQ	b4654	0.66	-1.6
4,360,322	-	yjdQ	b4654	0.66	+0.5
4,360,322	-	yjdQ	b4654	0.66	-1.2
4,360,330	-	yjdQ	b4654	0.71	+0.7
4,360,332	-	yjdQ	b4654	0.72	+0.8
4,360,342	+	yjdQ	b4654	0.79	+0.1
4,360,342	-	yjdQ	b4654	0.79	-2.7
4,360,380	-				-0.6
4,360,410	-				-1.4
4,360,415	-				+0.0
4,360,471	+				+2.2
4,360,486	+				-0.0
4,360,557	-				-0.6
4,360,557	-				-0.3
4,360,557	-				+0.4
4,360,557	-				-0.6
4,360,716	+				-0.6
4,360,805	-				+0.9
4,360,833	-	yjdC	b4135	0.13	-0.6
4,360,860	+	yjdC	b4135	0.18	+0.4
4,360,891	-	yjdC	b4135	0.23	-0.1
4,360,901	+	yjdC	b4135	0.25	-0.9
4,360,930	+	yjdC	b4135	0.30	+0.5
4,360,930	+	yjdC	b4135	0.30	+0.2
4,360,938	+	yjdC	b4135	0.32	+0.4
4,361,011	-	yjdC	b4135	0.44	-1.4
4,361,031	+	yjdC	b4135	0.48	+0.4
4,361,133	+	yjdC	b4135	0.65	-0.1
4,361,140	+	yjdC	b4135	0.67	+0.5
4,361,195	-	yjdC	b4135	0.76	-1.1
4,361,249	-	yjdC	b4135	0.86	+1.1
4,361,383	-				-1.6
4,361,383	-				+0.4
4,361,427	-				-1.3
4,361,443	+				-1.0
4,361,452	-				-1.1
4,361,500	+				-1.9
4,361,506	-				-2.8
4,361,531	+				+0.4
4,361,531	+				+0.9
4,361,537	+				-0.3
4,361,542	+	dipZ	b4136	0.10	-0.6
4,361,542	+	dipZ	b4136	0.10	-1.0
4,361,720	-	dipZ	b4136	0.21	-2.9
4,361,720	-	dipZ	b4136	0.21	-2.1
4,361,729	+	dipZ	b4136	0.21	+1.0
4,361,752	-	dipZ	b4136	0.23	-0.9
4,361,784	+				+0.4
4,361,784	+				+1.4
4,361,793	+	dipZ	b4136	0.25	+0.2
4,361,854	+	dipZ	b4136	0.29	+1.4
4,361,857	+	dipZ	b4136	0.29	-1.1
4,361,953	+	dipZ	b4136	0.34	-0.5
4,362,119	+	dipZ	b4136	0.44	-1.9
4,362,127	-	dipZ	b4136	0.45	-2.9
4,362,142	-	dipZ	b4136	0.46	-2.7
4,362,156	+	dipZ	b4136	0.46	-2.1
4,362,157	-	dipZ	b4136	0.46	-0.9
4,362,160	-	dipZ	b4136	0.47	-2.1
4,362,160	-	dipZ	b4136	0.47	-2.9
4,362,177	+	dipZ	b4136	0.48	-0.4
4,362,229	+	dipZ	b4136	0.51	+0.6
4,362,288	+	dipZ	b4136	0.54	+1.0
4,362,288	+	dipZ	b4136	0.54	-0.1