Strain Fitness in Escherichia coli BW25113 around b4073

Experiment: Bacitracin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 1 mg/ml
4,287,534	-	nrfB	b4071	0.47	-1.0
4,287,560	+	nrfB	b4071	0.51	-0.5
4,287,560	+	nrfB	b4071	0.51	+1.5
4,287,582	-	nrfB	b4071	0.55	-1.7
4,287,591	+	nrfB	b4071	0.57	+1.9
4,287,619	-	nrfB	b4071	0.62	+0.4
4,287,718	+	nrfB	b4071	0.79	+2.8
4,287,823	-				-0.5
4,287,823	-				+0.5
4,287,836	-				+0.9
4,287,836	-				-0.2
4,287,905	-	nrfC	b4072	0.11	+0.5
4,287,970	-	nrfC	b4072	0.21	+1.5
4,287,981	-	nrfC	b4072	0.22	+0.2
4,287,985	+	nrfC	b4072	0.23	+1.0
4,288,125	-	nrfC	b4072	0.44	+0.2
4,288,153	-	nrfC	b4072	0.48	+1.2
4,288,182	+	nrfC	b4072	0.52	+0.9
4,288,182	+	nrfC	b4072	0.52	-1.9
4,288,212	+	nrfC	b4072	0.57	+0.7
4,288,212	+	nrfC	b4072	0.57	+0.8
4,288,220	-	nrfC	b4072	0.58	-1.1
4,288,322	+	nrfC	b4072	0.73	-1.4
4,288,458	+				-1.8
4,288,465	+				-0.8
4,288,465	+				+0.1
4,288,465	+				-2.2
4,288,465	+				+0.1
4,288,543	-				-1.3
4,288,617	-	nrfD	b4073	0.12	+1.0
4,288,617	-	nrfD	b4073	0.12	-0.9
4,288,650	-	nrfD	b4073	0.16	+0.2
4,288,650	-	nrfD	b4073	0.16	+0.5
4,288,655	-	nrfD	b4073	0.16	+0.9
4,288,732	+	nrfD	b4073	0.24	+0.7
4,288,740	+	nrfD	b4073	0.25	+1.0
4,288,804	+	nrfD	b4073	0.32	+1.8
4,288,804	+	nrfD	b4073	0.32	+0.8
4,288,807	+	nrfD	b4073	0.32	+0.2
4,288,825	-	nrfD	b4073	0.34	-0.5
4,288,825	-	nrfD	b4073	0.34	-0.1
4,288,888	+	nrfD	b4073	0.41	+1.5
4,288,972	+	nrfD	b4073	0.49	-0.5
4,288,972	+	nrfD	b4073	0.49	+1.2
4,288,978	+	nrfD	b4073	0.50	+0.5
4,288,978	+	nrfD	b4073	0.50	-0.6
4,289,100	-	nrfD	b4073	0.63	+0.5
4,289,154	+	nrfD	b4073	0.68	+1.9
4,289,154	+				+1.5
4,289,163	+	nrfD	b4073	0.69	-0.8
4,289,170	+	nrfD	b4073	0.70	-1.7
4,289,170	+	nrfD	b4073	0.70	+1.1
4,289,324	+	nrfD	b4073	0.86	+0.1
4,289,324	+	nrfD	b4073	0.86	-0.1
4,289,324	+	nrfD	b4073	0.86	-1.7
4,289,361	+				+2.3
4,289,380	+				+2.0
4,289,543	-				-0.1
4,289,576	-				+0.5
4,289,621	+				+0.5
4,289,621	+				-1.1
4,289,647	+				-0.9
4,289,707	+	nrfE	b4074	0.10	-0.5
4,289,707	+	nrfE	b4074	0.10	+0.5
4,289,786	+	nrfE	b4074	0.15	-1.1
4,289,896	+	nrfE	b4074	0.22	+0.5
4,289,914	-	nrfE	b4074	0.23	+0.4
4,289,914	-	nrfE	b4074	0.23	-1.1
4,289,932	+	nrfE	b4074	0.24	-1.8
4,289,932	+				+1.5
4,289,985	+	nrfE	b4074	0.27	-1.7
4,289,985	+	nrfE	b4074	0.27	+1.7
4,290,140	+	nrfE	b4074	0.36	+1.1
4,290,255	+	nrfE	b4074	0.43	-1.1
4,290,255	+	nrfE	b4074	0.43	+0.4
4,290,265	-	nrfE	b4074	0.44	-0.1
4,290,415	-	nrfE	b4074	0.53	+0.0
4,290,415	-	nrfE	b4074	0.53	+0.8
4,290,441	-	nrfE	b4074	0.55	-0.1
4,290,443	+	nrfE	b4074	0.55	-1.0
4,290,443	+	nrfE	b4074	0.55	+0.8