Strain Fitness in Escherichia coli BW25113 around b3569

Experiment: Bacitracin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 1 mg/ml
3,732,011	+	xylH	b3568	0.23	-0.2
3,732,019	-	xylH	b3568	0.23	+0.3
3,732,019	-	xylH	b3568	0.23	+1.0
3,732,021	+	xylH	b3568	0.24	+0.1
3,732,111	-	xylH	b3568	0.31	+1.5
3,732,115	+	xylH	b3568	0.31	-0.1
3,732,123	-	xylH	b3568	0.32	-0.8
3,732,204	-	xylH	b3568	0.39	-0.8
3,732,220	-	xylH	b3568	0.40	+0.2
3,732,223	+	xylH	b3568	0.41	+0.3
3,732,372	+	xylH	b3568	0.53	-1.0
3,732,383	+	xylH	b3568	0.54	+0.7
3,732,391	-	xylH	b3568	0.55	+2.1
3,732,391	-	xylH	b3568	0.55	-1.8
3,732,399	-	xylH	b3568	0.55	+1.0
3,732,426	+	xylH	b3568	0.58	+0.0
3,732,452	-	xylH	b3568	0.60	+1.1
3,732,489	-	xylH	b3568	0.63	-0.1
3,732,555	+	xylH	b3568	0.69	-2.3
3,732,564	+	xylH	b3568	0.69	+1.2
3,732,776	+	xylH	b3568	0.87	+0.2
3,732,779	+	xylH	b3568	0.88	+0.5
3,732,779	+	xylH	b3568	0.88	-1.1
3,732,792	-	xylH	b3568	0.89	-1.5
3,732,819	+				-0.8
3,732,819	+				-0.1
3,732,819	-				+0.3
3,732,821	+				+0.5
3,732,884	+				+0.9
3,732,884	+				+0.9
3,732,889	+				-1.1
3,732,889	+				-0.1
3,732,891	+				-1.4
3,733,015	-				+2.2
3,733,015	-				+0.7
3,733,037	-				-0.6
3,733,063	+				-2.3
3,733,065	+				-0.3
3,733,069	-				+1.4
3,733,173	-	xylR	b3569	0.15	+2.0
3,733,173	-	xylR	b3569	0.15	-1.1
3,733,173	-	xylR	b3569	0.15	+1.0
3,733,190	-	xylR	b3569	0.16	-1.3
3,733,191	+	xylR	b3569	0.16	-0.6
3,733,191	+	xylR	b3569	0.16	+0.0
3,733,242	-	xylR	b3569	0.20	-0.3
3,733,257	+	xylR	b3569	0.22	-0.1
3,733,264	+	xylR	b3569	0.22	-0.4
3,733,264	+	xylR	b3569	0.22	+2.3
3,733,311	-	xylR	b3569	0.26	-0.1
3,733,311	-	xylR	b3569	0.26	+0.1
3,733,380	+	xylR	b3569	0.32	+0.0
3,733,380	+	xylR	b3569	0.32	-0.3
3,733,392	+	xylR	b3569	0.33	+0.2
3,733,421	-	xylR	b3569	0.36	-0.8
3,733,488	+	xylR	b3569	0.41	-0.8
3,733,685	-	xylR	b3569	0.58	+0.6
3,733,697	+	xylR	b3569	0.59	-1.2
3,733,697	+	xylR	b3569	0.59	-0.3
3,733,764	-	xylR	b3569	0.65	-0.2
3,733,823	+	xylR	b3569	0.70	+1.3
3,733,831	-	xylR	b3569	0.70	-0.7
3,733,831	-	xylR	b3569	0.70	+0.2
3,733,836	-	xylR	b3569	0.71	-1.3
3,733,863	+	xylR	b3569	0.73	-0.5
3,733,900	-	xylR	b3569	0.76	-2.8
3,733,937	+	xylR	b3569	0.79	-0.6
3,733,937	+	xylR	b3569	0.79	-0.7
3,733,963	+	xylR	b3569	0.82	-1.9
3,734,000	+	xylR	b3569	0.85	-1.7
3,734,003	-	xylR	b3569	0.85	+2.7
3,734,003	-	xylR	b3569	0.85	+1.8
3,734,024	+	xylR	b3569	0.87	-0.5
3,734,051	+	xylR	b3569	0.89	+2.3
3,734,060	-	xylR	b3569	0.90	-2.8
3,734,070	+				-0.4
3,734,094	-				+0.1
3,734,137	+				-0.5
3,734,137	+				+0.8
3,734,156	+				-1.1
3,734,171	-				+1.2
3,734,182	-				-0.4
3,734,244	-				+1.2
3,734,244	-				-0.5
3,734,297	+				+0.3
3,734,297	+				-0.5
3,734,321	-				+1.5
3,734,350	+				+0.6
3,734,353	+				-2.2
3,734,367	-				-0.1
3,734,368	-				-1.7
3,734,415	-				-0.8
3,734,415	-				-0.1
3,734,415	-				-2.9
3,734,415	-				-0.1
3,734,415	-				-1.5
3,734,491	+	bax	b3570	0.14	-1.3
3,734,491	-	bax	b3570	0.14	+0.6
3,734,495	+	bax	b3570	0.14	-0.8
3,734,522	+	bax	b3570	0.18	-0.8
3,734,607	-	bax	b3570	0.28	-1.8
3,734,704	-	bax	b3570	0.40	-1.3
3,734,713	-	bax	b3570	0.41	-1.3
3,734,723	-	bax	b3570	0.42	-1.9
3,734,723	-	bax	b3570	0.42	-2.6
3,734,762	-				+0.5
3,734,766	-	bax	b3570	0.47	-2.7
3,734,800	-	bax	b3570	0.51	+0.1
3,734,803	+	bax	b3570	0.52	-0.1
3,734,803	+	bax	b3570	0.52	-0.7
3,734,814	+	bax	b3570	0.53	-3.0
3,734,829	+	bax	b3570	0.55	-1.2
3,734,829	+	bax	b3570	0.55	-0.5
3,734,868	+	bax	b3570	0.60	-2.5
3,734,909	+	bax	b3570	0.65	-2.8
3,734,914	+	bax	b3570	0.65	-1.3
3,734,945	+	bax	b3570	0.69	+0.5
3,734,945	+	bax	b3570	0.69	-3.2
3,734,945	+	bax	b3570	0.69	-0.3
3,734,945	+	bax	b3570	0.69	-1.8
3,734,976	-	bax	b3570	0.73	-0.1
3,735,031	-	bax	b3570	0.79	-1.4
3,735,064	-	bax	b3570	0.83	-1.1
3,735,101	+	bax	b3570	0.88	-2.7
3,735,101	+	bax	b3570	0.88	-1.1
3,735,101	+	bax	b3570	0.88	-0.8
3,735,101	+	bax	b3570	0.88	-2.0
3,735,109	-	bax	b3570	0.89	-1.8
3,735,115	-	bax	b3570	0.90	-2.5
3,735,117	-	bax	b3570	0.90	-0.8
3,735,117	-	bax	b3570	0.90	-1.1
3,735,134	-				-2.1