Strain Fitness in Escherichia coli BW25113 around b3247

Experiment: Bacitracin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 1 mg/ml
3,393,446	+	yhdP	b4472	0.78	-2.9
3,393,446	+	yhdP	b4472	0.78	-1.1
3,393,496	-	yhdP	b4472	0.79	-1.6
3,393,496	-	yhdP	b4472	0.79	+0.4
3,393,555	-	yhdP	b4472	0.81	-3.5
3,393,561	-	yhdP	b4472	0.81	-1.9
3,393,574	+	yhdP	b4472	0.81	-0.6
3,393,574	+	yhdP	b4472	0.81	-0.6
3,393,605	+	yhdP	b4472	0.82	-2.8
3,393,646	+	yhdP	b4472	0.83	-2.4
3,393,677	-	yhdP	b4472	0.84	-4.6
3,393,730	-	yhdP	b4472	0.86	-1.6
3,393,749	+	yhdP	b4472	0.86	-3.1
3,393,749	+	yhdP	b4472	0.86	-0.9
3,393,768	+	yhdP	b4472	0.87	-2.6
3,393,772	-	yhdP	b4472	0.87	-3.4
3,393,773	+	yhdP	b4472	0.87	-1.7
3,393,773	+	yhdP	b4472	0.87	-0.6
3,393,791	-	yhdP	b4472	0.87	-2.7
3,393,884	-	yhdP	b4472	0.90	-2.1
3,393,895	-	yhdP	b4472	0.90	-1.9
3,393,895	-	yhdP	b4472	0.90	-0.6
3,393,897	+	yhdP	b4472	0.90	-4.3
3,393,905	-				-2.4
3,393,906	+				-1.6
3,393,989	-				-2.4
3,394,001	-				-0.6
3,394,001	-				-0.9
3,394,062	+				+0.4
3,394,062	+				-1.6
3,394,171	-				-3.6
3,394,188	+				-0.9
3,394,207	-				-2.3
3,394,220	-				-3.3
3,394,235	-				-1.1
3,394,279	+				-3.4
3,394,343	-				-0.1
3,394,353	+				-2.8
3,394,354	-				+2.8
3,394,354	-				+0.9
3,394,354	-				+0.9
3,394,467	+				-2.6
3,394,475	-				+1.4
3,394,486	+				+1.4
3,394,486	+				-0.1
3,394,486	+				-2.9
3,394,617	+	cafA	b3247	0.18	-2.1
3,394,626	-	cafA	b3247	0.19	-0.0
3,394,651	+	cafA	b3247	0.21	-2.6
3,394,651	+	cafA	b3247	0.21	-1.7
3,394,722	+	cafA	b3247	0.25	-3.4
3,394,818	+	cafA	b3247	0.32	-1.1
3,394,898	+	cafA	b3247	0.37	-2.0
3,394,922	+	cafA	b3247	0.39	-0.1
3,395,036	+	cafA	b3247	0.47	-3.4
3,395,041	-	cafA	b3247	0.47	-0.7
3,395,041	-	cafA	b3247	0.47	-2.0
3,395,044	-	cafA	b3247	0.47	+2.0
3,395,097	-	cafA	b3247	0.51	-1.7
3,395,105	-	cafA	b3247	0.51	-1.1
3,395,121	+	cafA	b3247	0.53	-3.7
3,395,139	-	cafA	b3247	0.54	-0.4
3,395,188	+	cafA	b3247	0.57	-1.6
3,395,193	+	cafA	b3247	0.57	-1.7
3,395,201	-	cafA	b3247	0.58	-1.7
3,395,231	+	cafA	b3247	0.60	-3.2
3,395,254	-	cafA	b3247	0.62	+0.4
3,395,254	-	cafA	b3247	0.62	-1.7
3,395,272	-	cafA	b3247	0.63	-1.7
3,395,283	+	cafA	b3247	0.64	-3.6
3,395,291	-	cafA	b3247	0.64	-2.1
3,395,292	+	cafA	b3247	0.64	-2.9
3,395,292	+	cafA	b3247	0.64	-1.4
3,395,318	-	cafA	b3247	0.66	-1.7
3,395,318	-	cafA	b3247	0.66	+0.9
3,395,328	-	cafA	b3247	0.67	-1.1
3,395,330	+	cafA	b3247	0.67	-2.6
3,395,330	+	cafA	b3247	0.67	-1.4
3,395,335	+	cafA	b3247	0.67	-2.3
3,395,387	-	cafA	b3247	0.71	+0.4
3,395,397	+	cafA	b3247	0.71	-2.4
3,395,397	+	cafA	b3247	0.71	-2.4
3,395,414	-	cafA	b3247	0.73	-2.5
3,395,479	-	cafA	b3247	0.77	-1.7
3,395,532	+	cafA	b3247	0.81	-2.5
3,395,532	+	cafA	b3247	0.81	-2.1
3,395,542	+	cafA	b3247	0.81	-2.8
3,395,560	-	cafA	b3247	0.82	-0.1
3,395,568	-	cafA	b3247	0.83	-0.9
3,395,568	-	cafA	b3247	0.83	+1.4
3,395,599	+	cafA	b3247	0.85	-1.9
3,395,599	+	cafA	b3247	0.85	-1.9
3,395,666	-	cafA	b3247	0.90	-0.1
3,395,677	+				-3.3
3,395,689	+				-2.0
3,395,690	+				-2.1
3,395,690	+				-2.5
3,395,787	+				-1.4
3,395,893	-	yhdE	b3248	0.14	+1.7
3,395,897	-	yhdE	b3248	0.15	-1.1
3,395,897	-	yhdE	b3248	0.15	+0.9
3,395,923	+	yhdE	b3248	0.20	-1.7
3,395,923	+	yhdE	b3248	0.20	-3.3
3,395,941	+	yhdE	b3248	0.23	-2.4
3,395,956	-	yhdE	b3248	0.25	+1.6
3,395,964	-	yhdE	b3248	0.26	+2.5
3,395,966	+	yhdE	b3248	0.27	-2.1
3,395,987	-	yhdE	b3248	0.30	-1.6
3,395,987	-	yhdE	b3248	0.30	+1.7
3,396,058	-	yhdE	b3248	0.42	+2.4
3,396,117	-	yhdE	b3248	0.52	+4.4
3,396,139	+	yhdE	b3248	0.56	-2.8
3,396,166	-	yhdE	b3248	0.60	-0.1
3,396,166	-	yhdE	b3248	0.60	+0.9
3,396,176	-	yhdE	b3248	0.62	+1.4
3,396,186	-	yhdE	b3248	0.64	+1.8
3,396,192	+	yhdE	b3248	0.65	-1.7
3,396,231	+	yhdE	b3248	0.71	-0.7
3,396,231	+	yhdE	b3248	0.71	-0.1
3,396,256	+	yhdE	b3248	0.76	-2.9
3,396,267	+	yhdE	b3248	0.77	-2.6
3,396,269	+	yhdE	b3248	0.78	-2.4
3,396,275	-	yhdE	b3248	0.79	+1.4
3,396,275	-	yhdE	b3248	0.79	+1.5
3,396,287	-	yhdE	b3248	0.81	+0.4
3,396,287	-	yhdE	b3248	0.81	+4.6
3,396,307	-	yhdE	b3248	0.84	+1.9
3,396,317	-	yhdE	b3248	0.86	+1.5
3,396,333	-	yhdE	b3248	0.89	+2.1
3,396,344	-				+1.0
3,396,344	-				+1.8
3,396,364	-				+0.4
3,396,364	-				-0.1
3,396,417	-				+0.6