Strain Fitness in Escherichia coli BW25113 around b2893
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,035,135 | - | recJ | b2892 | 0.43 | -2.2 |
3,035,270 | + | recJ | b2892 | 0.50 | +0.5 |
3,035,433 | + | recJ | b2892 | 0.60 | -1.2 |
3,035,454 | - | recJ | b2892 | 0.61 | +0.3 |
3,035,489 | + | recJ | b2892 | 0.63 | -1.0 |
3,035,680 | - | recJ | b2892 | 0.74 | -1.5 |
3,035,751 | - | recJ | b2892 | 0.78 | -0.2 |
3,035,751 | - | recJ | b2892 | 0.78 | -0.1 |
3,035,754 | + | recJ | b2892 | 0.78 | -0.4 |
3,035,754 | + | recJ | b2892 | 0.78 | -2.4 |
3,035,757 | - | recJ | b2892 | 0.79 | -1.0 |
3,035,762 | - | recJ | b2892 | 0.79 | -3.0 |
3,035,768 | + | recJ | b2892 | 0.79 | -0.7 |
3,035,768 | + | recJ | b2892 | 0.79 | -0.2 |
3,035,776 | - | recJ | b2892 | 0.80 | -2.3 |
3,035,789 | - | recJ | b2892 | 0.80 | -0.5 |
3,035,789 | - | recJ | b2892 | 0.80 | +0.6 |
3,035,802 | + | recJ | b2892 | 0.81 | -0.7 |
3,035,802 | + | recJ | b2892 | 0.81 | -2.4 |
3,035,807 | + | +1.3 | |||
3,035,815 | - | recJ | b2892 | 0.82 | -3.3 |
3,035,854 | - | recJ | b2892 | 0.84 | -0.7 |
3,035,854 | - | recJ | b2892 | 0.84 | +1.3 |
3,035,864 | - | recJ | b2892 | 0.85 | -0.1 |
3,035,869 | - | recJ | b2892 | 0.85 | -2.2 |
3,035,906 | - | recJ | b2892 | 0.87 | -2.5 |
3,035,906 | - | +1.4 | |||
3,035,960 | - | +0.6 | |||
3,035,996 | - | -0.1 | |||
3,035,996 | - | -0.2 | |||
3,035,996 | - | -0.1 | |||
3,036,046 | - | +0.4 | |||
3,036,068 | - | -0.5 | |||
3,036,229 | + | dsbC | b2893 | 0.13 | -2.6 |
3,036,229 | - | dsbC | b2893 | 0.13 | -2.6 |
3,036,268 | + | dsbC | b2893 | 0.19 | -3.1 |
3,036,457 | - | dsbC | b2893 | 0.45 | -1.8 |
3,036,511 | + | dsbC | b2893 | 0.53 | -2.0 |
3,036,511 | + | dsbC | b2893 | 0.53 | -0.2 |
3,036,613 | - | dsbC | b2893 | 0.67 | -3.1 |
3,036,626 | - | dsbC | b2893 | 0.69 | -1.8 |
3,036,660 | - | dsbC | b2893 | 0.74 | -1.6 |
3,036,660 | - | dsbC | b2893 | 0.74 | -1.5 |
3,036,666 | + | dsbC | b2893 | 0.75 | -3.2 |
3,036,668 | + | dsbC | b2893 | 0.75 | -2.5 |
3,036,761 | + | dsbC | b2893 | 0.88 | -2.0 |
3,037,372 | + | xerD | b2894 | 0.56 | -2.0 |
3,037,773 | + | +1.6 | |||
3,037,777 | + | -2.2 | |||
3,037,777 | + | +1.8 |
Or see this region's nucleotide sequence