Strain Fitness in Escherichia coli BW25113 around b2803
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,934,514 | + | fucI | b2802 | 0.51 | +1.5 |
2,934,522 | - | fucI | b2802 | 0.52 | -0.7 |
2,934,533 | - | fucI | b2802 | 0.52 | +0.6 |
2,934,536 | + | fucI | b2802 | 0.52 | -1.7 |
2,934,536 | + | fucI | b2802 | 0.52 | -0.9 |
2,934,546 | - | fucI | b2802 | 0.53 | +0.3 |
2,934,546 | - | fucI | b2802 | 0.53 | -1.0 |
2,934,554 | - | fucI | b2802 | 0.53 | -0.2 |
2,934,565 | - | fucI | b2802 | 0.54 | -0.2 |
2,934,565 | - | fucI | b2802 | 0.54 | +0.0 |
2,934,565 | - | fucI | b2802 | 0.54 | +0.3 |
2,934,565 | - | fucI | b2802 | 0.54 | +0.1 |
2,934,622 | - | fucI | b2802 | 0.57 | -0.1 |
2,934,643 | + | fucI | b2802 | 0.58 | -1.2 |
2,934,671 | + | fucI | b2802 | 0.60 | -2.2 |
2,934,692 | + | fucI | b2802 | 0.61 | -0.4 |
2,934,762 | + | fucI | b2802 | 0.65 | -0.5 |
2,935,022 | - | fucI | b2802 | 0.80 | +0.2 |
2,935,044 | - | fucI | b2802 | 0.81 | +0.2 |
2,935,101 | + | fucI | b2802 | 0.84 | +0.5 |
2,935,126 | - | fucI | b2802 | 0.86 | +0.1 |
2,935,153 | + | fucI | b2802 | 0.87 | +0.8 |
2,935,156 | + | fucI | b2802 | 0.87 | -0.5 |
2,935,156 | + | fucI | b2802 | 0.87 | -1.6 |
2,935,186 | + | fucI | b2802 | 0.89 | +0.8 |
2,935,186 | + | fucI | b2802 | 0.89 | -0.8 |
2,935,236 | + | +1.3 | |||
2,935,236 | + | -0.8 | |||
2,935,300 | + | +1.0 | |||
2,935,321 | + | -0.2 | |||
2,935,378 | + | +0.0 | |||
2,935,398 | - | +0.8 | |||
2,935,432 | - | +0.7 | |||
2,935,433 | + | +0.2 | |||
2,935,504 | - | +0.0 | |||
2,935,504 | - | +0.3 | |||
2,935,518 | + | +0.4 | |||
2,935,589 | - | +0.4 | |||
2,935,686 | + | fucK | b2803 | 0.16 | +0.8 |
2,935,817 | + | fucK | b2803 | 0.25 | +0.7 |
2,935,929 | + | fucK | b2803 | 0.32 | +0.6 |
2,935,929 | + | fucK | b2803 | 0.32 | +0.5 |
2,936,145 | - | fucK | b2803 | 0.47 | +0.7 |
2,936,230 | + | fucK | b2803 | 0.53 | -0.5 |
2,936,304 | + | fucK | b2803 | 0.58 | -1.8 |
2,936,330 | + | fucK | b2803 | 0.60 | -2.4 |
2,936,330 | + | fucK | b2803 | 0.60 | -0.7 |
2,936,382 | - | fucK | b2803 | 0.64 | +0.7 |
2,936,382 | - | fucK | b2803 | 0.64 | +0.9 |
2,936,392 | - | fucK | b2803 | 0.64 | -0.2 |
2,936,441 | + | fucK | b2803 | 0.68 | +0.3 |
2,936,538 | + | fucK | b2803 | 0.74 | +0.9 |
2,936,538 | + | fucK | b2803 | 0.74 | -0.7 |
2,936,628 | + | fucK | b2803 | 0.81 | +0.5 |
2,936,630 | + | fucK | b2803 | 0.81 | -0.3 |
2,936,630 | + | fucK | b2803 | 0.81 | +0.7 |
2,936,656 | + | fucK | b2803 | 0.83 | -0.8 |
2,936,656 | + | fucK | b2803 | 0.83 | -0.5 |
2,936,664 | - | fucK | b2803 | 0.83 | -0.0 |
2,936,664 | - | fucK | b2803 | 0.83 | -1.0 |
2,936,808 | - | +0.6 | |||
2,936,845 | + | -2.9 | |||
2,936,845 | + | -0.0 | |||
2,936,974 | - | fucU | b2804 | 0.15 | +0.3 |
2,936,974 | - | fucU | b2804 | 0.15 | +0.3 |
2,937,103 | + | fucU | b2804 | 0.46 | -1.1 |
2,937,103 | + | fucU | b2804 | 0.46 | -1.1 |
2,937,173 | + | fucU | b2804 | 0.62 | -0.4 |
2,937,434 | - | +1.0 | |||
2,937,434 | - | +2.3 | |||
2,937,439 | - | +1.3 | |||
2,937,473 | - | fucR | b2805 | 0.11 | +1.3 |
2,937,629 | + | fucR | b2805 | 0.33 | -1.7 |
2,937,677 | - | fucR | b2805 | 0.39 | -0.2 |
2,937,677 | - | fucR | b2805 | 0.39 | +1.3 |
2,937,681 | + | fucR | b2805 | 0.40 | +1.3 |
2,937,747 | - | fucR | b2805 | 0.49 | +0.9 |
2,937,769 | + | fucR | b2805 | 0.52 | -1.5 |
2,937,769 | + | fucR | b2805 | 0.52 | -1.1 |
2,937,811 | - | fucR | b2805 | 0.58 | -0.1 |
2,937,811 | - | fucR | b2805 | 0.58 | +0.2 |
2,937,817 | + | fucR | b2805 | 0.58 | +0.7 |
2,937,862 | + | fucR | b2805 | 0.64 | -0.0 |
Or see this region's nucleotide sequence