Strain Fitness in Escherichia coli BW25113 around b2682
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,806,745 | + | ygaY | b2681 | 0.35 | +0.9 |
2,806,753 | - | ygaY | b2681 | 0.35 | +1.0 |
2,806,753 | - | ygaY | b2681 | 0.35 | +1.1 |
2,806,759 | + | ygaY | b2681 | 0.36 | -1.7 |
2,806,759 | + | ygaY | b2681 | 0.36 | +0.6 |
2,806,760 | + | ygaY | b2681 | 0.36 | -0.7 |
2,806,870 | + | ygaY | b2681 | 0.45 | +1.1 |
2,806,870 | + | ygaY | b2681 | 0.45 | +0.6 |
2,806,876 | - | ygaY | b2681 | 0.46 | +0.2 |
2,806,876 | - | ygaY | b2681 | 0.46 | -1.0 |
2,806,925 | - | ygaY | b2681 | 0.50 | +0.9 |
2,807,086 | + | ygaY | b2681 | 0.63 | +1.0 |
2,807,111 | - | ygaY | b2681 | 0.66 | +0.8 |
2,807,111 | - | ygaY | b2681 | 0.66 | -1.2 |
2,807,327 | - | ygaY | b2681 | 0.84 | -0.8 |
2,807,604 | + | +1.7 | |||
2,807,646 | + | -2.4 | |||
2,807,646 | + | +0.3 | |||
2,807,853 | - | ygaZ | b2682 | 0.29 | -2.2 |
2,807,917 | - | ygaZ | b2682 | 0.38 | -1.2 |
2,807,917 | - | ygaZ | b2682 | 0.38 | -1.0 |
2,807,919 | - | ygaZ | b2682 | 0.38 | -0.8 |
2,808,115 | - | ygaZ | b2682 | 0.64 | +0.1 |
2,808,115 | - | ygaZ | b2682 | 0.64 | +0.9 |
2,808,190 | + | ygaZ | b2682 | 0.75 | -0.7 |
2,808,190 | + | ygaZ | b2682 | 0.75 | -2.1 |
2,808,198 | - | ygaZ | b2682 | 0.76 | -0.2 |
2,808,322 | - | -1.4 | |||
2,808,322 | - | +0.8 | |||
2,808,379 | - | +1.6 | |||
2,808,379 | - | +0.1 | |||
2,808,399 | - | +0.3 | |||
2,808,515 | + | ygaH | b2683 | 0.44 | -0.1 |
2,808,517 | - | ygaH | b2683 | 0.45 | +0.3 |
2,808,533 | + | ygaH | b2683 | 0.50 | -2.4 |
2,808,533 | + | ygaH | b2683 | 0.50 | +0.3 |
2,808,534 | - | ygaH | b2683 | 0.50 | -1.6 |
2,808,534 | - | ygaH | b2683 | 0.50 | +0.6 |
2,808,560 | - | ygaH | b2683 | 0.58 | +0.6 |
2,808,565 | - | +0.3 | |||
2,808,645 | + | ygaH | b2683 | 0.83 | -2.0 |
2,808,645 | + | ygaH | b2683 | 0.83 | +0.4 |
2,808,645 | + | ygaH | b2683 | 0.83 | +0.0 |
2,808,648 | - | ygaH | b2683 | 0.84 | +0.3 |
2,808,655 | + | ygaH | b2683 | 0.86 | -2.1 |
2,808,658 | - | ygaH | b2683 | 0.87 | -0.9 |
2,808,660 | - | ygaH | b2683 | 0.88 | +1.3 |
2,808,662 | + | ygaH | b2683 | 0.88 | +1.2 |
2,808,662 | + | ygaH | b2683 | 0.88 | -1.2 |
2,808,671 | - | -1.8 | |||
2,808,876 | - | mprA | b2684 | 0.16 | -1.5 |
2,809,004 | - | mprA | b2684 | 0.40 | -0.7 |
2,809,100 | + | mprA | b2684 | 0.58 | -0.7 |
2,809,100 | + | mprA | b2684 | 0.58 | -1.4 |
2,809,107 | + | mprA | b2684 | 0.59 | +0.1 |
2,809,200 | + | mprA | b2684 | 0.77 | -0.2 |
2,809,287 | + | -0.4 |
Or see this region's nucleotide sequence