Strain Fitness in Escherichia coli BW25113 around b2674
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,798,044 | + | +0.3 | |||
2,798,044 | + | +0.8 | |||
2,798,048 | + | +1.2 | |||
2,798,049 | + | -1.2 | |||
2,798,049 | + | +1.3 | |||
2,798,216 | + | ygaM | b2672 | 0.18 | -1.7 |
2,798,340 | + | ygaM | b2672 | 0.54 | -0.7 |
2,798,387 | + | ygaM | b2672 | 0.68 | +0.9 |
2,798,395 | - | ygaM | b2672 | 0.70 | -0.0 |
2,798,427 | + | ygaM | b2672 | 0.79 | +0.9 |
2,798,481 | - | +0.4 | |||
2,798,481 | - | +0.1 | |||
2,798,600 | + | +0.4 | |||
2,798,614 | - | -0.9 | |||
2,798,834 | + | nrdH | b2673 | 0.36 | -1.3 |
2,798,849 | + | nrdH | b2673 | 0.42 | -1.8 |
2,798,917 | + | nrdH | b2673 | 0.70 | -0.2 |
2,798,917 | + | nrdH | b2673 | 0.70 | -0.7 |
2,798,983 | + | +0.3 | |||
2,798,983 | + | -0.5 | |||
2,798,991 | - | +0.2 | |||
2,799,158 | + | nrdI | b2674 | 0.42 | +0.3 |
2,799,191 | + | nrdI | b2674 | 0.50 | +0.5 |
2,799,251 | + | nrdI | b2674 | 0.64 | -0.6 |
2,799,410 | - | -1.2 | |||
2,799,505 | - | -0.7 | |||
2,799,517 | + | +0.5 | |||
2,799,535 | - | +0.8 | |||
2,799,535 | - | +0.6 | |||
2,799,535 | - | +3.5 | |||
2,799,535 | - | -1.8 | |||
2,799,631 | + | nrdE | b2675 | 0.12 | +0.3 |
2,799,631 | - | nrdE | b2675 | 0.12 | -2.0 |
2,799,756 | + | nrdE | b2675 | 0.18 | -0.2 |
2,799,764 | - | nrdE | b2675 | 0.18 | -0.0 |
2,799,764 | - | nrdE | b2675 | 0.18 | -0.2 |
2,799,784 | - | nrdE | b2675 | 0.19 | +0.2 |
2,799,784 | - | nrdE | b2675 | 0.19 | +0.6 |
2,800,103 | - | nrdE | b2675 | 0.34 | -0.8 |
2,800,115 | + | nrdE | b2675 | 0.35 | +0.5 |
2,800,151 | + | nrdE | b2675 | 0.36 | +1.7 |
2,800,168 | - | nrdE | b2675 | 0.37 | +1.3 |
2,800,168 | - | nrdE | b2675 | 0.37 | +2.3 |
2,800,248 | + | nrdE | b2675 | 0.41 | +1.0 |
Or see this region's nucleotide sequence