Strain Fitness in Escherichia coli BW25113 around b2571
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,704,865 | - | lepA | b2569 | 0.84 | +1.3 |
2,704,992 | + | -0.2 | |||
2,705,007 | - | -0.2 | |||
2,705,209 | - | -0.7 | |||
2,705,227 | - | -1.5 | |||
2,705,227 | - | +0.3 | |||
2,705,249 | - | -0.3 | |||
2,705,259 | - | +0.8 | |||
2,705,268 | + | +0.6 | |||
2,705,500 | + | rseC | b2570 | 0.33 | +1.6 |
2,705,500 | + | rseC | b2570 | 0.33 | +0.2 |
2,705,554 | - | rseC | b2570 | 0.44 | +2.9 |
2,705,594 | + | rseC | b2570 | 0.52 | +0.5 |
2,705,652 | + | rseC | b2570 | 0.64 | +0.9 |
2,705,652 | + | rseC | b2570 | 0.64 | +0.6 |
2,705,662 | + | rseC | b2570 | 0.66 | +0.2 |
2,705,662 | + | rseC | b2570 | 0.66 | -0.2 |
2,705,673 | + | rseC | b2570 | 0.69 | +1.2 |
2,705,699 | - | rseC | b2570 | 0.74 | +1.7 |
2,705,699 | - | rseC | b2570 | 0.74 | +3.9 |
2,705,760 | + | rseC | b2570 | 0.87 | -0.2 |
2,705,761 | - | rseC | b2570 | 0.87 | +1.3 |
2,705,761 | - | rseC | b2570 | 0.87 | +1.1 |
2,705,783 | - | -0.2 | |||
2,705,783 | - | -1.5 | |||
2,705,814 | - | +0.1 | |||
2,705,915 | + | -2.4 | |||
2,705,915 | + | -1.0 | |||
2,705,923 | - | rseB | b2571 | 0.11 | -3.4 |
2,705,987 | - | rseB | b2571 | 0.17 | -1.0 |
2,706,013 | + | rseB | b2571 | 0.20 | -2.4 |
2,706,190 | - | rseB | b2571 | 0.39 | -1.2 |
2,706,190 | - | rseB | b2571 | 0.39 | -0.7 |
2,706,211 | - | rseB | b2571 | 0.41 | -0.7 |
2,706,307 | + | rseB | b2571 | 0.51 | -2.8 |
2,706,315 | - | rseB | b2571 | 0.52 | -0.2 |
2,706,315 | - | rseB | b2571 | 0.52 | -1.2 |
2,706,322 | + | rseB | b2571 | 0.52 | -2.9 |
2,706,397 | - | rseB | b2571 | 0.60 | -1.8 |
2,706,399 | + | rseB | b2571 | 0.61 | -2.0 |
2,706,524 | + | rseB | b2571 | 0.74 | -0.7 |
2,706,524 | + | rseB | b2571 | 0.74 | -2.4 |
2,706,576 | + | rseB | b2571 | 0.79 | -2.7 |
2,706,601 | + | rseB | b2571 | 0.82 | +1.3 |
2,706,601 | + | rseB | b2571 | 0.82 | -0.2 |
2,706,654 | + | rseB | b2571 | 0.87 | -3.1 |
2,706,696 | + | -2.3 | |||
2,706,711 | - | -3.5 | |||
2,706,711 | - | -3.2 | |||
2,706,724 | - | -3.1 | |||
2,706,738 | + | -3.4 | |||
2,706,754 | - | -2.9 | |||
2,706,754 | - | -1.0 | |||
2,706,822 | - | -1.0 | |||
2,706,822 | - | +0.8 | |||
2,706,857 | - | rseA | b2572 | 0.12 | -1.5 |
2,706,857 | - | rseA | b2572 | 0.12 | -2.6 |
2,706,857 | - | rseA | b2572 | 0.12 | -1.7 |
2,706,867 | - | rseA | b2572 | 0.14 | -1.7 |
2,706,867 | - | rseA | b2572 | 0.14 | -2.4 |
2,706,909 | - | rseA | b2572 | 0.20 | -0.5 |
2,706,909 | - | rseA | b2572 | 0.20 | -2.6 |
2,706,945 | - | rseA | b2572 | 0.26 | -1.2 |
2,707,085 | - | rseA | b2572 | 0.47 | -2.1 |
2,707,102 | - | rseA | b2572 | 0.50 | -2.2 |
2,707,183 | + | rseA | b2572 | 0.63 | -0.7 |
2,707,254 | + | rseA | b2572 | 0.73 | -0.2 |
2,707,254 | + | rseA | b2572 | 0.73 | -1.0 |
2,707,426 | - | -1.5 | |||
2,707,436 | - | +1.7 | |||
2,707,436 | - | -0.2 | |||
2,707,437 | - | -0.8 | |||
2,707,440 | + | -0.7 |
Or see this region's nucleotide sequence