Strain Fitness in Escherichia coli BW25113 around b2484
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,601,925 | + | -1.8 | |||
2,601,925 | + | +1.7 | |||
2,601,988 | - | hyfC | b2483 | 0.13 | +0.1 |
2,602,127 | + | hyfC | b2483 | 0.27 | +1.3 |
2,602,127 | + | hyfC | b2483 | 0.27 | +1.7 |
2,602,150 | - | hyfC | b2483 | 0.30 | -0.8 |
2,602,199 | - | hyfC | b2483 | 0.35 | +0.3 |
2,602,199 | - | hyfC | b2483 | 0.35 | -0.1 |
2,602,325 | + | hyfC | b2483 | 0.48 | +0.9 |
2,602,350 | + | hyfC | b2483 | 0.51 | -0.1 |
2,602,379 | + | hyfC | b2483 | 0.54 | +0.2 |
2,602,382 | - | hyfC | b2483 | 0.54 | -0.3 |
2,602,432 | - | hyfC | b2483 | 0.59 | +0.7 |
2,602,620 | - | hyfC | b2483 | 0.79 | -0.7 |
2,602,620 | - | hyfC | b2483 | 0.79 | -0.3 |
2,602,813 | + | -0.8 | |||
2,602,813 | + | +0.7 | |||
2,603,063 | - | hyfD | b2484 | 0.16 | +0.3 |
2,603,095 | - | hyfD | b2484 | 0.18 | +1.1 |
2,603,151 | + | hyfD | b2484 | 0.22 | -0.8 |
2,603,151 | + | hyfD | b2484 | 0.22 | +1.1 |
2,603,293 | + | hyfD | b2484 | 0.32 | +1.3 |
2,603,301 | - | hyfD | b2484 | 0.33 | -1.3 |
2,603,328 | - | hyfD | b2484 | 0.34 | -1.7 |
2,603,369 | + | hyfD | b2484 | 0.37 | +0.4 |
2,603,430 | + | hyfD | b2484 | 0.41 | -1.8 |
2,603,464 | - | hyfD | b2484 | 0.44 | -1.0 |
2,603,464 | - | hyfD | b2484 | 0.44 | -0.1 |
2,603,477 | - | hyfD | b2484 | 0.45 | -1.3 |
2,603,547 | - | hyfD | b2484 | 0.50 | -0.3 |
2,603,570 | - | hyfD | b2484 | 0.51 | -0.3 |
2,603,574 | + | hyfD | b2484 | 0.51 | -1.8 |
2,603,574 | + | hyfD | b2484 | 0.51 | +0.1 |
2,603,613 | + | hyfD | b2484 | 0.54 | +0.9 |
2,603,716 | + | hyfD | b2484 | 0.61 | -1.3 |
2,603,726 | + | hyfD | b2484 | 0.62 | +3.7 |
2,603,726 | + | hyfD | b2484 | 0.62 | -1.4 |
2,603,783 | + | hyfD | b2484 | 0.66 | -1.8 |
2,603,882 | + | hyfD | b2484 | 0.73 | +2.1 |
2,603,882 | + | hyfD | b2484 | 0.73 | -0.3 |
2,603,933 | - | hyfD | b2484 | 0.76 | -1.0 |
2,603,933 | - | hyfD | b2484 | 0.76 | -0.4 |
2,604,064 | - | hyfD | b2484 | 0.85 | +0.8 |
2,604,064 | - | hyfD | b2484 | 0.85 | +1.3 |
2,604,216 | + | -1.7 | |||
2,604,216 | + | +0.9 | |||
2,604,284 | - | +0.0 | |||
2,604,284 | - | -0.5 | |||
2,604,340 | + | -1.4 | |||
2,604,488 | + | hyfE | b2485 | 0.31 | -0.2 |
2,604,488 | + | hyfE | b2485 | 0.31 | -0.2 |
2,604,513 | - | hyfE | b2485 | 0.35 | +0.3 |
2,604,598 | - | hyfE | b2485 | 0.48 | -0.1 |
2,604,626 | + | hyfE | b2485 | 0.53 | +0.3 |
2,604,700 | + | hyfE | b2485 | 0.64 | -1.2 |
2,604,708 | - | hyfE | b2485 | 0.65 | -0.4 |
2,604,708 | - | hyfE | b2485 | 0.65 | -0.8 |
2,604,828 | + | hyfE | b2485 | 0.84 | -1.5 |
2,604,862 | - | hyfE | b2485 | 0.89 | +1.3 |
2,604,882 | + | -0.4 | |||
2,604,882 | + | -0.7 | |||
2,605,055 | - | +0.3 | |||
2,605,065 | - | +0.7 | |||
2,605,065 | - | +0.3 | |||
2,605,071 | - | -0.5 | |||
2,605,140 | - | hyfF | b2486 | 0.13 | -1.5 |
2,605,210 | + | hyfF | b2486 | 0.17 | -1.8 |
2,605,256 | + | hyfF | b2486 | 0.20 | +0.0 |
Or see this region's nucleotide sequence