Strain Fitness in Escherichia coli BW25113 around b2314
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,428,063 | + | purF | b2312 | 0.87 | -2.2 |
2,428,064 | - | purF | b2312 | 0.87 | -0.5 |
2,428,064 | - | purF | b2312 | 0.87 | +0.3 |
2,428,146 | - | +0.0 | |||
2,428,157 | - | -0.8 | |||
2,428,194 | + | -2.5 | |||
2,428,194 | + | -1.9 | |||
2,428,202 | - | -1.1 | |||
2,428,202 | - | -1.1 | |||
2,428,203 | - | -0.5 | |||
2,428,385 | - | cvpA | b2313 | 0.18 | -2.6 |
2,428,458 | - | cvpA | b2313 | 0.33 | -0.3 |
2,428,510 | - | cvpA | b2313 | 0.44 | -2.3 |
2,428,649 | + | cvpA | b2313 | 0.72 | -2.7 |
2,428,657 | - | cvpA | b2313 | 0.74 | -0.3 |
2,428,657 | - | cvpA | b2313 | 0.74 | -1.3 |
2,428,684 | - | cvpA | b2313 | 0.79 | -3.0 |
2,428,723 | + | cvpA | b2313 | 0.87 | -2.1 |
2,428,775 | + | -1.1 | |||
2,428,775 | + | -2.2 | |||
2,428,816 | - | -2.3 | |||
2,428,818 | - | -3.5 | |||
2,428,818 | - | +0.3 | |||
2,428,986 | - | +6.9 | |||
2,429,015 | - | +7.1 | |||
2,429,016 | + | -2.8 | |||
2,429,072 | - | +6.7 | |||
2,429,111 | - | dedD | b2314 | 0.10 | +3.8 |
2,429,281 | - | dedD | b2314 | 0.36 | +5.1 |
2,429,281 | - | dedD | b2314 | 0.36 | +4.4 |
2,429,287 | - | dedD | b2314 | 0.37 | +5.1 |
2,429,461 | - | dedD | b2314 | 0.63 | +3.8 |
2,429,480 | + | dedD | b2314 | 0.66 | -2.4 |
2,429,596 | - | dedD | b2314 | 0.83 | -1.7 |
2,429,596 | - | dedD | b2314 | 0.83 | -0.7 |
2,429,646 | - | +0.8 | |||
2,429,646 | - | -2.5 |
Or see this region's nucleotide sequence